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Name : topB (SC1320) Accession : YP_216307.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 1417586 - 1419592 bp Length : 2007 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : TTGGCGAACTGGTCGAGGCCCGCGGCGGTCGCGCTATGGTTGAGATTCGTTAACCTGATGCGGTTGTTTATTGCCGAAAA ACCGAGTCTGGGGCGCGCCATTGCGGATGTGCTGCCAAAACCGCACCGTAAAGGCGATGGTTTTATTGAGTGCGGAAACG GGCAGGTCGTCACCTGGTGTATTGGTCATTTGCTGGAACAGGCGCAGCCGGATGCGTATGACAGCCGTTATGCGCGCTGG AATCTGGCTGACCTGCCTATCGTGCCGGAAAAATGGCAGCTTCAGCCTCGTCCTTCCGTCACCAAACAGCTCAATGTGAT TAAGCGCTTTTTGCATCAAGCCGGTGAAATTATTCACGCTGGCGACCCGGATCGCGAAGGGCAGCTTCTGGTTGATGAAG TGCTGGATTATCTCCAGCTTCCTGCCGAAAAGCGCCAACAGGTGCGGCGTTGTCTGATAAACGACCTTAACCCGCAGGCG GTCGAGCGTGCTATCGACAGGCTGCGAGCGAACAGCGACTTCGTGCCGCTGTGCGTCTCCGCGCTGGCGCGAGCGCGAGC GGACTGGCTGTATGGCATTAATATGACCCGCGCTTACACGATCCTGGGCCGTAATGCTGGCTATCAGGGCGTGTTATCCG TGGGACGCGTACAGACGCCGGTACTGGGGCTGGTGGTGCGGCGAGACGAAGAGATTGAGAACTTCGTCGCCAAAGACTTC TTTGAAGTGAAGGCGCACATCGTTACGCCTGCCGACGAGCGTTTTACCGCTATCTGGCAGCCGAGCGAGGCGTGCGAACC TTATCAGGATGAAGAAGGGCGCTTGCTGCATCGTCCGCTGGCGGAGCATGTGGTGAACCGAATCAACGGTCAGCCCGCGC TGGTAACCAGTTATAATGATAAACGGGAATCAGAATCCGCGCCGCTGCCGTTTTCGCTCTCGACGCTACAGATTGAAGCC GCTAAACGCTTTGGCCTGAGCGCGCAAAACGTGCTTGATATTTGTCAGAAGCTATATGAAACCCACAAACTGATTACCTA TCCGCGTTCCGACTGCCGTTATCTGCCGGAAGAACACTTTGCCGGACGGCAGGCGGTCATGAACGCGATTAGCGTCCACG CCCCGGATTTACTGCCGCAGCCTGTGGTTAATCCTGATACGCGCAATCGCTGCTGGGATGACAAAAAAGTGGATGCGCAC CACGCGATTATCCCGACGGCGCGCAGTTCTTCTGTCCATCTGACGGAAAACGAAGCGAAAGTGTACACCCTGATTGCGCG TCAGTATCTGATGCAGTTCTGCCCGGACGCGGTGTTTCGTAAATGCGTTATTGAACTGGAAATCGCCAAAGGGAAATTTG TCGCCAAAGCGCGTTTTCTGGCGGAGGCCGGTTGGCGGACGTTACTGGGCAGTAAAGAGCGCGACGAGGAAAACGACGGT ACGCCGCTGCCGGTTGTCGCCAAAGGTGATGAGTTGCTGTGTGAAAAGGGGGAAGTGGTCGAGCGCCAAACCCAGCCGCC GCGTCATTTCACTGATGCGACATTGCTTTCCGCGATGACCGGAATTGCCCGCTTCGTGCAGGATAAAGATCTGAAAAAGA TCCTGCGCGCGACCGATGGGCTGGGGACGGAAGCCACGCGCGCCGGGATTATCGAGCTGCTGTTCAAACGTAGCTTTCTG ACCAAAAAAGGGCGCTACATTCATTCTACCGATGCTGGCAAAGCGTTAATACATTCGCTGCCGGAAATGGCGGCCCGTCC AGATATGACCGCGCACTGGGAATCTGTTTTGACGCAAATCAGCGAAAAGCAGTGCCGTTACCAGGATTTCATGCAACCGC TGGTCGGCACGTTATATCAGCTGATCGAGCAGGCTAAGCGCACGCCGGTGAAGCGCTTCAGAGGGATAGTCGCGCCAGGC GGTGGAGACAAGAAAAAGAGCGCGCCGCGTAAGCGAGCGGGCAAAAAAAGCCCGCCTGCTAAGGAGACAGGCCGTCAGAC CGAATAA Protein sequence : MANWSRPAAVALWLRFVNLMRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARW NLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHQAGEIIHAGDPDREGQLLVDEVLDYLQLPAEKRQQVRRCLINDLNPQA VERAIDRLRANSDFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDF FEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRINGQPALVTSYNDKRESESAPLPFSLSTLQIEA AKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRQAVMNAISVHAPDLLPQPVVNPDTRNRCWDDKKVDAH HAIIPTARSSSVHLTENEAKVYTLIARQYLMQFCPDAVFRKCVIELEIAKGKFVAKARFLAEAGWRTLLGSKERDEENDG TPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRSFL TKKGRYIHSTDAGKALIHSLPEMAARPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIEQAKRTPVKRFRGIVAPG GGDKKKSAPRKRAGKKSPPAKETGRQTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-102 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 6e-110 | 41 |
