Gene Information

Name : potB (SC1176)
Accession : YP_216163.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Unknown
Product : spermidine/putrescine ABC transporter membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 1292547 - 1293410 bp
Length : 864 bp
Strand : -
Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component

DNA sequence :
ATGAAGAACACAAGTAAATTCCAGAATGTAGTGATTGTCACTATCGTCGGTTGGCTTGTGTTATTTGTTTTTCTGCCCAA
CCTGATGATCATTGGCACCAGCTTTCTGACCCGTGACGACGCCAGTTTCGTCAAGATGGTCTTTACGCTGGATAACTACG
CGCGCCTGCTCGATCCGCTCTATTTTGAAGTGCTCCTGCACTCTCTGAATATGGCGCTGATCGCCACCCTCTCCTGCCTG
GTGCTGGGCTATCCTTTTGCCTGGTTTCTGGCGAAGTTACCGGAAAAGATACGTCCGTTATTGCTGTTTTTGCTGATTGT
TCCTTTCTGGACCAACTCACTGATCCGCATCTATGGGCTGAAAATATTCCTGAGCACTAAAGGTTATCTCAATGAATTCC
TGCTGTGGCTGGGCGTGATTGATACACCGATTCGCATCATGTTCACCCCGAGCGCCGTTATTATCGGCCTGGTTTACATT
TTGCTGCCATTTATGGTCATGCCGCTCTACTCCAGCATTGAGAAGCTCGACAAACCACTACTGGAGGCCGCACGCGATCT
CGGCGCCAGTAAAATGCAAACGTTCATCCGCATCATTATTCCATTAACCATGCCGGGCATTGTCGCCGGTTGCCTGCTCG
TGATGCTACCGGCAATGGGCCTGTTCTACGTCTCCGATTTAATGGGTGGCGCGAAAAACCTGCTGATTGGTAACATCATT
AAGGTACAGTTCCTGAATATTCGCGATTGGCCGTTTGGCGCGGCTACCAGCATTACGCTGACCATTGTGATGGGACTCAT
GCTGTTGATTTACTGGCGGGCTTCCCGCTTATTGAATAAGAAGGTGAGTGATATAAGCGATTAA

Protein sequence :
MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYARLLDPLYFEVLLHSLNMALIATLSCL
VLGYPFAWFLAKLPEKIRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
LLPFMVMPLYSSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNII
KVQFLNIRDWPFGAATSITLTIVMGLMLLIYWRASRLLNKKVSDISD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 4e-122 97