Gene Information

Name : pipA (SC1039)
Accession : YP_216026.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : pathogenicity island encoded protein: SPI3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1156160 - 1156840 bp
Length : 681 bp
Strand : -
Note : IPR006025: Neutral zinc metallopeptidases, zinc-binding site

DNA sequence : 
ATGCTTCCGGTCACCTACAGATTAATACCTCAAAGCGGAGTATCCACATATAGATTAAATACCGCAGATACACCTGTTTT
CCCCGATATTCCCGAACATGCACCAAACCCCTCACGGCTACGCCTTGCTCATGACAGCCTTGCCATAAACAGGGAATTCC
GTCTGGAGCCAGAGTGTGTGGTGGAGTACCTTATCTCAGGCGCGGGTGGAATAGACCCTGATACAGAAATTGATGACGAC
ATTTATGACGAATGCTACGATGAACTATCCTCCGTACTTCAAAATGCGTACACCCAAAGCGAAACATTCCGCAGACTGAT
GAATTACGCATATGAAAAAGAACTACATGATGTGGAGCAGCGCTGGCTACTGGGGGCCGGCGAAGCCTTTGAAACTACCG
TGGCTCAGGAACACTTCAAACTTTCAGAAGGCAGGAAAGTTATTTGTCTCAATCTGGACGATTCTGATGATTCATATACC
GAACATTATGAAAGTAACGAAGGAAGACAACTTTTTGACACAAAACGTTCATTTATTCATGAAGTTGTACATGCACTGAC
CCATCTTCAGGATAAAAAAGAAAATCATCCAAGAGGCCCTGTTGTCGAATATACCAACATTATTCTGAAAGAGATGGGGC
ATCCTTCACCTCCCAGAATGGTCTACATCTTCAATAAATAG

Protein sequence : 
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINREFRLEPECVVEYLISGAGGIDPDTEIDDD
IYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGRQLFDTKRSFIHEVVHALTHLQDKKENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 7e-94 100
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 5e-93 99
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 6e-91 98
pipA AAC33726.1 PipA Virulence SPI-5 Protein 1e-90 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 VFG0588 Protein 2e-93 99