Gene Information

Name : tnpM (SC057)
Accession : YP_209362.1
Strain :
Genome accession: NC_006856
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2200
EC number : -
Position : 45648 - 46256 bp
Length : 609 bp
Strand : +
Note : IPR001633: EAL domain

DNA sequence : 
GTGCCGGAGTGCGCTCACCGCTTGATGCGCTGCCGCCCCTCACTAGTGAGAGGTAGGGCAGCGCAAGTCAATCCTGGCGG
ATTCACTACCCCTGCGCGAAGGCCATCGGTGCCGCATCGAACGGCCGGTTGCGGAAAGTCCTCCCTGCGTCCGCTGATGG
CCGGCAGCAGCCCGTCGTTGCCTGATGGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTTCTGACGTTCAGTGCAGC
CGTCTTCTGAAAACGACAATGGAGGTGGTAGCCGAGGGTGTGGAAACACCCGACTGCCTTGCGTGGTTGCGGCAGGCGGG
TTGCGACACGGTGCAGGGTTTCCTGTTCGCCAGGCCGATGCCGGCGGCGGCCTTCGTCGGCTTCGTCAACCAATGGAGGA
ACACCACCATGAACGCCAATGAACCGAGCACCAGTTGCTGCGTGTGCTGCAAGGAAATCCCGCTCGATGCCGCCTTCACG
CCGGAAGGGGCCGAGTACGTGGAGCATTTCTGCGGGCTGGAGTGCTATCAGCGCTTCCAGGCGCGGGCCAGCACTGCGAC
CGAAACCAGCGTCAAACCGGACGCTTGTGATTCGCCGCCGTCAGGTTGA

Protein sequence : 
MPECAHRLMRCRPSLVRGRAAQVNPGGFTTPARRPSVPHRTAGCGKSSLRPLMAGSSPSLPDGSNPSAAIVQSASDVQCS
RLLKTTMEVVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVNQWRNTTMNANEPSTSCCVCCKEIPLDAAFT
PEGAEYVEHFCGLECYQRFQARASTATETSVKPDACDSPPSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpM AAL08438.1 TnpM Not tested SRL Protein 7e-86 100
tnpM YP_001844880.1 hypothetical protein Not tested AbaR20 Protein 2e-64 100
tnpM YP_005797129.1 transposase Not tested AbaR4e Protein 2e-64 100
tnpM YP_005797144.1 transposase Not tested AbaR4e Protein 2e-64 100
tnpM CAJ77081.1 Transposase Not tested AbaR1 Protein 6e-90 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpM YP_209362.1 hypothetical protein VFG1029 Protein 3e-86 100