Gene Information

Name : int2 (SC029)
Accession : YP_209334.1
Strain :
Genome accession: NC_006856
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 23420 - 24433 bp
Length : 1014 bp
Strand : -
Note : IPR002104: phage integrase; IPR004107: phage integrase, N-terminal SAM-like; drug-resistance protein

DNA sequence : 
ATGAAAACCGCCACTGCGCCGTTACCACCGCTGCGTTCGGTCAAGGTTCTGGACCAGTTGCGTGAGCGCATACGCTACTT
GCATTACAGTTTACGAACCGAACAGGCTTATGTCAACTGGGTTCGTGCCTTCATCCGTTTCCACGGTGTGCGTCACCCGG
CAACCTTGGGCAGCAGCGAAGTCGAGGCATTTCTGTCCTGGCTGGCGAACGAGCGCAAGGTTTCGGTCTCCACGCATCGT
CAGGCATTGGCGGCCTTGCTGTTCTTCTACGGCAAGGTGCTGTGCACGGATCTGCCCTGGCTTCAGGAGATCGGAAGACC
TCGGCCGTCGCGGCGCTTGCCGGTGGTGCTGACCCCGGATGAAGTGGTTCGCATCCTCGGTTTTCTGGAAGGCGAGCATC
GTTTGTTCGCCCAGCTTCTGTATGGAACGGGCATGCGGATCAGTGAGGGTTTGCAACTGCGGGTCAAGGATCTGGATTTC
GATCACGGCACGATCATCGTGCGGGAGGGCAAGGGCTCCAAGGATCGGGCCTTGATGTTACCCGAGAGCTTGGCACCCAG
CCTGCGCGAGCAGCTGTCGCGTGCACGGGCATGGTGGCTGAAGGACCAGGCCGAGGGCCGCAGCGGCGTTGCGCTTCCCG
ACGCCCTTGAGCGGAAGTATCCGCGCGCCGGGCATTCCTGGCCGTGGTTCTGGGTTTTTGCGCAGCACACGCATTCGACC
GATCCACGGAGCGGTGTCGTGCGTCGCCATCACATGTATGACCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAACA
AGCAGGCATCACGAAGCCCGCCACACCGCACACCCTCCGCCACTCGTTCGCGACGGCCTTGCTCCGCAGCGGTTACGACA
TTCGAACCGTGCAGGATCTGCTCGGCCATTCCGACGTCTCTACGACGATGATTTACACGCATGTGCTGAAAGTTGGCGGT
GCCGGAGTGCGCTCACCGCTTGATGCGCTGCCGCCCCTCACTAGTGAGAGGTAG

Protein sequence : 
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVNWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHR
QALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHST
DPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGG
AGVRSPLDALPPLTSER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 2e-150 100
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 3e-150 100
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 2e-150 100
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 3e-150 100
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 2e-150 100
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 6e-113 100
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 2e-150 100
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 2e-150 100
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 2e-150 100
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 2e-150 100
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 2e-150 100
intI YP_001844881.1 integrase Not tested AbaR20 Protein 3e-150 100
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 2e-150 100
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 3e-150 100
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 1e-149 99
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 1e-149 99
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 1e-149 99
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 1e-149 99
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 9e-149 99
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 4e-150 99
intI1 AAK02045.1 integrase Not tested SGI1 Protein 1e-149 99
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 4e-150 99
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 1e-149 99
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 5e-150 99
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 1e-149 99
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 1e-149 99
int1 YP_005160012.1 integrase Not tested Not named Protein 1e-121 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
int2 YP_209334.1 hypothetical protein VFG1028 Protein 5e-149 99