Gene Information

Name : tnpA (SC174)
Accession : YP_209471.1
Strain :
Genome accession: NC_006856
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 135314 - 135577 bp
Length : 264 bp
Strand : -
Note : IPR002514: transposase, IS3/IS911family

DNA sequence :
ATGAAGAAGCGTTTTTCCGACGAACAGATCATCAGTATTCTCCGCGAAGCCGAAGCTGGGGTACCCGCCCGTGAACTCTG
CCGCAAGCATGCCATTTCCGATGCCACGTTTTACACCTGGCGTAAGAAGTATGGCGGTATGGAGGTGCCTGAAGTTAAGC
GCCTGAAGTCGCTTGAGGAAGAGAACACCAGACTCAAGAAGCTGCTTGCCGAAGCCATGCTGGATAAAGAGGCGCTTCAG
GTGGCTCTTGGGCGAAAGTACTGA

Protein sequence :
MKKRFSDEQIISILREAEAGVPARELCRKHAISDATFYTWRKKYGGMEVPEVKRLKSLEEENTRLKKLLAEAMLDKEALQ
VALGRKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 6e-25 69
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-24 68
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 9e-25 68
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 9e-25 68
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-18 51
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-18 51
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 3e-18 45