Gene Information

Name : cat2 (SC011)
Accession : YP_209316.1
Strain :
Genome accession: NC_006856
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyl transferase II
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : -
Position : 10014 - 10655 bp
Length : 642 bp
Strand : -
Note : CAT-II; IPR001707: chloramphenicol acetyl transferase

DNA sequence : 
ATGAATTTTACCCGGATTGACCTGAATACCTGGAATCGCAGGGAACATTTTGCCCTTTATCGTCAGCAGATTAAATGCGG
ATTCAGCCTGACCACCAAACTCGATATTACCGCTTTGCGTACTGCACTGGCGAAAACCGGTTATAAGTTTTATCCGCTGA
TGATTTACCTGATCTCCCGGGCTGTTAATCAGTTTCCGGAGTTCCGGATGGCAATGAAAGATAATGAACTGATTTACTGG
GAACAGTCAGACCCGGTCTTTACTGTCTTTCATAAAGAAACCGAAACATTCTCCGCACTGTCCTGCCGTTATTTTCCGGA
TCTCAGTGAGTTTATGGCGGGTTATAACGCGGTAACAGCAGAATATCAGCATGATACCAGGTTGTTTCCGCAGGGAAATT
TACCGGAGAATCACCTGAATATATCATCGTTACCCTGGGTGAGTTTTGACGGATTTAATCTGAATATCACCGGAAATGAT
GATTATTTTTCCCCGGTTTTTACAATGGCAAAGTTTCAGCAGGAAGGTGACCGCGTACTATTACCTGTTTCTGTACAGGT
TCATCATGCAGTCTGTGATGGTTTTCATGCAGCAAGGTTTATCAATACACTTCAGCTGATGTGTGATAACATACTGAAAT
AA

Protein sequence : 
MNFTRIDLNTWNRREHFALYRQQIKCGFSLTTKLDITALRTALAKTGYKFYPLMIYLISRAVNQFPEFRMAMKDNELIYW
EQSDPVFTVFHKETETFSALSCRYFPDLSEFMAGYNAVTAEYQHDTRLFPQGNLPENHLNISSLPWVSFDGFNLNITGND
DYFSPVFTMAKFQQEGDRVLLPVSVQVHHAVCDGFHAARFINTLQLMCDNILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catA2 ACF06176.1 chloramphenicol acetyltransferase II Not tested Tn5036-like Protein 5e-92 92
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 6e-47 46
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 4e-47 46
cat AAL08441.1 chloramphenicol acetyltransferase Not tested SRL Protein 2e-46 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat2 YP_209316.1 chloramphenicol acetyl transferase II CP004022.1.gene799.p Protein 1e-50 47
cat2 YP_209316.1 chloramphenicol acetyl transferase II NC_010410.6002590.p0 Protein 2e-47 46
cat2 YP_209316.1 chloramphenicol acetyl transferase II NC_011586.7045194.p0 Protein 2e-47 46
cat2 YP_209316.1 chloramphenicol acetyl transferase II NC_010558.1.6276004. Protein 2e-47 46
cat2 YP_209316.1 chloramphenicol acetyl transferase II NC_010426.6155849.p0 Protein 4e-38 42
cat2 YP_209316.1 chloramphenicol acetyl transferase II NC_010427.6155852.p0 Protein 4e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat2 YP_209316.1 chloramphenicol acetyl transferase II VFG1032 Protein 1e-46 45