Gene Information

Name : VF_B0007 (VF_B0007)
Accession : YP_207137.1
Strain :
Genome accession: NC_006842
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 3771 - 4268 bp
Length : 498 bp
Strand : -
Note : -

DNA sequence : 
ATGTGTGCACTGGTCGGGAATAATCCAAGACCTCAACAACGAGAAAAATCTATGTTTACTGAAAATGAAAAAATGATCCT
TGCAGAAGCGGCTTCAATTATTGAAGTTAAGATCAGAAATACATCTGCGTTAACGTCTCCTGATTTAGCGGCTGAGTTAT
GTGTTAATCGTCTTGTTCATCAAGAGCGTGAAGTCTTCGCCATTCTAATGTTAGACAACCAACACCGTTTAATTAAATTT
GTTGAGCATAGTGTTGGGTCAATTTCGAGTGCTTCGGTTTACCCAAGAGAAGTGCTTAAATCTGTGCTGCATTATAACGC
AGCAGCCGTGATTTTTGCTCATAATCATCCGTCAGGTGTTGCAGAGCCGAGCGATGCGGATAGACGCATTACCGCTCGAT
TATCATCAGCATTAGAGCTTATTGATGTAAAAGTGCTTGATCATTTTGTGATAGGAGTTGGTGAAACGGTCTCTTTTGCT
AAAAGAGGTTGGATCTAA

Protein sequence : 
MCALVGNNPRPQQREKSMFTENEKMILAEAASIIEVKIRNTSALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRLIKF
VEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSALELIDVKVLDHFVIGVGETVSFA
KRGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 7e-31 55
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-30 55
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-30 55
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-30 55
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VF_B0007 YP_207137.1 DNA repair protein RadC VFG1119 Protein 1e-30 55