Gene Information

Name : tcpE (VF_A0867)
Accession : YP_206825.1
Strain :
Genome accession: NC_006841
Putative virulence/resistance : Virulence
Product : toxin coregulated pilus biosynthesis protein TcpE
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 979538 - 980584 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence : 
ATGATGATGAATCGCTTGTTTTTTCAGTTTATCAATCAGAAAAATAGATTGATTTTATATAGATTGTTATCAGATTTGAT
TGATGATGGCATTCCAGTATTTGACGCTTTAGTTTTAGTTAAGAATGAAGGTGGTCAATCTGTTTATGGTCGAAATTTTA
TTAAAAGTTTAGATCGTATAATTTTTAATATGAAAACGGTTTCTTCTGTCACAAAAGCACTTGACGGAATTATTCCTCCG
CAAGATCTTACTGTTCTTAATGCTGCTGAGCAATCAGGACAATTATCTAATGGCTTAAGAATGCTAGTCTCAATGATTGA
AAAGAATAATAATATTAGCTCATTATTAAAAAAATCATTATTAACACCTACTATCTTAGTGATTGTTGTTTTATTTGTTA
TTATGGGATATTCACTTCAAGTATTCCCAACATTTTTAGGTGTTTTACCTATCACGCAGTGGCCTGAAGTAACGAGAGCT
CTATATACATTTGGTATATATTTATCTAATGGTGGTTTAATCACAATATTTATTTCATCTATAGTTATTGGTTTTTTTGT
ATGGATATCAATGCCATTAATGTCAGGGAAGGTTAGGAATGAAATGTTGGATAAAATACCACCATATAATTATTATAAAG
AGATTCAAGTTGGATTATTTTTGAGAATGCTATCTACATTAATGCTTAATGGTGTTCCTATGGTTGATAGTATATCTTTA
ATACAAGAACGAGCCTCTATTTGGTTAAAATCACATTTGTCATTATTTGAAACTAATATGAAAAAAGGGGTAAGTTATAA
GGAAGCCTTAAATACAGGTTTTCTAACAAATGAAATGTTATTAACAATTGCACTTTATGCTAATTTAGATTCTTTTTCTT
TAACTGTAAAAAAAATGTCAGATATCAGCGAAATTAAAATAATTGGTGATATTGAAAAGCTAAGCGGAATATTAAAAAAT
ATATCATTAATTATGTTGGCAGGTTCAGTAATCTGGATCTTTGGTGCGATATTTAGCTTGGTTGATAAATTAGGTTCAGG
ATTTTAG

Protein sequence : 
MMMNRLFFQFINQKNRLILYRLLSDLIDDGIPVFDALVLVKNEGGQSVYGRNFIKSLDRIIFNMKTVSSVTKALDGIIPP
QDLTVLNAAEQSGQLSNGLRMLVSMIEKNNNISSLLKKSLLTPTILVIVVLFVIMGYSLQVFPTFLGVLPITQWPEVTRA
LYTFGIYLSNGGLITIFISSIVIGFFVWISMPLMSGKVRNEMLDKIPPYNYYKEIQVGLFLRMLSTLMLNGVPMVDSISL
IQERASIWLKSHLSLFETNMKKGVSYKEALNTGFLTNEMLLTIALYANLDSFSLTVKKMSDISEIKIIGDIEKLSGILKN
ISLIMLAGSVIWIFGAIFSLVDKLGSGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpE YP_001216317.1 toxin co-regulated pilus biosynthesis protein E Virulence VPI-1 Protein 1e-53 43
tcpE AAK20763.1 toxin-coregulated pilus biosynthesis protein E Virulence VPI Protein 8e-54 43
tcpE AAK20793.1 toxin-coregulated pilus biosynthesis protein E Virulence VPI Protein 8e-54 43
tcpE CAA45463.1 - Virulence VPI Protein 8e-54 43
VC0836 NP_230484.1 toxin co-regulated pilus biosynthesis protein E Virulence VPI-1 Protein 1e-53 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcpE YP_206825.1 toxin coregulated pilus biosynthesis protein TcpE VFG0099 Protein 4e-54 43