Gene Information

Name : VF_A0790 (VF_A0790)
Accession : YP_206748.1
Strain :
Genome accession: NC_006841
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : 2.3.1.28
Position : 886006 - 886662 bp
Length : 657 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGCGTTTAATAGTTGGCTTGAAGGTCAAAACCTCAAAGAACAGGTTAAGAACCCAAATATTGAAGTTGGAGATTA
TAGCTATTATTCAGGTTTTTATCACTCTAAGACCTTTGAGGAGCAAGCTGTTCGTTACTTATTAGGAGATGCTCCTACAC
AAGAAGTGTGGGAGAGCGGACAGTTTGGAGAGGTTGATAAACTCCGAATAGGTAAATTTTGCTCTATTGCATCAGGGGCA
ACATTTATGATGGCTGGCAATCAAGGACATAGAGCCGATTGGATATCAACATTTCCATTTTCAAAAAAAGAGTTTGGCGA
AGGTGTGAAAGATGGCTTTCAAAGAGCTGGCGATACCATTGTGGGTAACGATGTATGGATTGGTAGTGAGGCAATGATTA
TGCCTGGCGTTCATATTGGAGATGGTGCAATCATTGGAGCTAGAGCCGTTATTACTAAAAATGTGGCACCTTATTCCGTT
GTGGTAGGAAATAATGTGGTGGTTAAAAAACGATTTGATGAAAATTTAATTCAAACATTATTAGTCATAAAGTGGTGGGA
TTGGCCACTGCAACACATTAAAAATACAATGGAGATCCTATGTAGTGGGCATATTGAAGAATTAGAGCAGTATTTTATAA
AGAATGTAGGCTCTTAA

Protein sequence : 
MEAFNSWLEGQNLKEQVKNPNIEVGDYSYYSGFYHSKTFEEQAVRYLLGDAPTQEVWESGQFGEVDKLRIGKFCSIASGA
TFMMAGNQGHRADWISTFPFSKKEFGEGVKDGFQRAGDTIVGNDVWIGSEAMIMPGVHIGDGAIIGARAVITKNVAPYSV
VVGNNVVVKKRFDENLIQTLLVIKWWDWPLQHIKNTMEILCSGHIEELEQYFIKNVGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-42 54
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-40 52
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-40 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-42 54
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 2e-38 53
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 6e-41 52
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 6e-41 52
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 6e-40 52
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 6e-51 50
VF_A0790 YP_206748.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 1e-30 43