Gene Information

Name : intA (VF_A0548)
Accession : YP_206506.1
Strain :
Genome accession: NC_006841
Putative virulence/resistance : Unknown
Product : phage family integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 630681 - 631880 bp
Length : 1200 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTCGTCAAGTAATTCGTCTTACTGATAGAAAGATAAAATCAGCAGCACCAACAGGGAAAGAATTTACATTATCTGA
TGGTGAAGGATTACAATTGCGTGTACGTCCAACTGGGGCTAAATCATGGCAATTTAAATTCAGTGACCCTGTAACAAGAA
AGATTCAGAAAATAGCACTTGGCCCTTATCCTGAATTATCTCTTGCTAATGCTCGATCCAAAACAACTGAGTACCGAACA
CTCTTAGCTCAAAAAATCAACCCTAAGTCATTTGAACAAAGTAAAGAGCTTGAGGCGAAAAGAGTACAGACGTCGACTTT
TATCGTAGTTGCAGAACAATGGTTTGAACGAAAAAAAGAAACGGTTTCTCCTGCGCATTCATACCGGGAATGGCGGACAT
TAGAAAAATATATTTTCCCTCATATGAGCAAAATTCCTGTTGCTACGATCACTGCTGTAGAAACAATAGATGTATTACGA
CCTCTAGAAAAAGAAGGTAAATACTCGACGGTTAAACGAATTTGCCAAAGCCTTAACCAAATCATGGATTACTCAGTTAA
CCACGGTTTAATACACGCAAATCCATTAGCAAAAATAATTAAAGTTTTTCGTAAAAATACAGTTTTGCACATGCCTACTA
TTCGGCCAGAGCAATTACCTGATTTTTTAAAACGACTGCATTCATGTTCAACAATACAAACTAAAACTAAATTGCTCATT
TTATGGCAGCTACACACAATGACGCGCCCAAAGGAAGCGGCAACAACTCGCTGGATAGATATTGATTTAGAAAAAGGCGT
ATGGACTATCCCTGCTGAGAATATGAAACGCAGAAAAGAACACCGTATACCGCTGACATCACAAGCAATCAACATTCTGA
ATCAGATTCGATTACAAAGCAAACGATGTGATTATGTCTTTCCTGGTGAGCGAGATATAAATAGCCATGTAAGCTTGTTT
ACAGCAAATGCAGCCATAAAGCGTAGTCTTGGGCTAAAAGATGAGTTAGTTGCTCATGGATTGCGTGCTATAGCTTCTAC
TGCCCTTCACGAGTACGGTTTTGATAGTTTATTGATTGAAGCTTGTTTATCACATGCCGACCAAAATGAAGTGAGAGCCA
GTTACAACCGTTCTGATTATTTAGAACAAAGAAAAGAGATTATGTGCTGGTGGAGTAATTATATAGATGAGGCAGCGTAA

Protein sequence : 
MARQVIRLTDRKIKSAAPTGKEFTLSDGEGLQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPELSLANARSKTTEYRT
LLAQKINPKSFEQSKELEAKRVQTSTFIVVAEQWFERKKETVSPAHSYREWRTLEKYIFPHMSKIPVATITAVETIDVLR
PLEKEGKYSTVKRICQSLNQIMDYSVNHGLIHANPLAKIIKVFRKNTVLHMPTIRPEQLPDFLKRLHSCSTIQTKTKLLI
LWQLHTMTRPKEAATTRWIDIDLEKGVWTIPAENMKRRKEHRIPLTSQAINILNQIRLQSKRCDYVFPGERDINSHVSLF
TANAAIKRSLGLKDELVAHGLRAIASTALHEYGFDSLLIEACLSHADQNEVRASYNRSDYLEQRKEIMCWWSNYIDEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-89 45
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-89 45
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-89 45
int AAK20773.1 integrase Not tested VPI Protein 1e-89 45
int AAK20803.1 integrase Not tested VPI Protein 1e-89 45
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-85 44
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-82 44
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-82 44
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 8e-83 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
intA YP_206506.1 phage family integrase VFG1092 Protein 4e-83 44