Gene Information

Name : VF_A0436 (VF_A0436)
Accession : YP_206394.1
Strain :
Genome accession: NC_006841
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 499648 - 500325 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATATTGGTTATTGAAGACGACCAAACAACTCGAGATTTTGTGACTAAAGCGCTAGAACAAGAAGGCTTCATTGT
TGATAGTTCTGATGATGGCAAAGAAGGTTTAATGATGGCGATAAGTTGTGATTATCAATTAATCATTCTTGACCGCATGC
TACCTAATCTTGATGGGTTAAAAATCCTATCAGCAATTCGTGCTACAGGAAATAATACCCCTGTGCTTATTCTTAGTGCA
TTAGATAGCGTCGATCAAAGGGTTGAAGGACTTACTGCAGGTAGTGACGATTACCTAACCAAACCTTTTGCTTTAGCTGA
GCTATTAGCTCGTATCAATATCATATTACGTCGAAATAGACCGATTGAAAGTGCTTCTAACGAACTGAAAATTAAGAATT
TAAACATCAATTTACGTTCGCAAAAAGTCACGATCAATGACAACATTGTTCCATTACAAAATAAAGAATTTATTTTATTA
CGTTATCTTGCGGAAAATGCTGATGAAGTGGTTTCTCGAATGCGATTATTTGAAGCTGCATGGGATTATCACTTTGATCC
AAAAACCAATGTTATTGATGTTCATATTGCTAAGTTACGCAAAAAATTAGATAACTCTGGAGCTGTGGATCTCATCGAAA
CCGTACGTGGAGCTGGTTATGTTCTTAGAACAACGTGA

Protein sequence : 
MKILVIEDDQTTRDFVTKALEQEGFIVDSSDDGKEGLMMAISCDYQLIILDRMLPNLDGLKILSAIRATGNNTPVLILSA
LDSVDQRVEGLTAGSDDYLTKPFALAELLARINIILRRNRPIESASNELKIKNLNINLRSQKVTINDNIVPLQNKEFILL
RYLAENADEVVSRMRLFEAAWDYHFDPKTNVIDVHIAKLRKKLDNSGAVDLIETVRGAGYVLRTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-34 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0125 Protein 3e-33 45
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0347 Protein 6e-34 44
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0111 Protein 6e-36 44
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0197 Protein 2e-31 43
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0308 Protein 2e-32 42
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_007793.3914065.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_002758.1121390.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_010079.5776364.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_002952.2859858.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_007622.3794948.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein AE015929.1.gene1106. Protein 3e-23 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_003923.1003417.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_013450.8614146.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein NC_002951.3238224.p0 Protein 2e-26 41
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0083 Protein 5e-29 41
VF_A0436 YP_206394.1 transcriptional regulatory protein BAC0638 Protein 6e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VF_A0436 YP_206394.1 transcriptional regulatory protein VFG0596 Protein 6e-35 46
VF_A0436 YP_206394.1 transcriptional regulatory protein VFG1389 Protein 1e-29 44
VF_A0436 YP_206394.1 transcriptional regulatory protein VFG1390 Protein 8e-32 41