Gene Information

Name : iucD (VF_A0164)
Accession : YP_206122.1
Strain :
Genome accession: NC_006841
Putative virulence/resistance : Virulence
Product : aerobactin siderophore biosynthesis protein IucD
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : 1.14.13.59
Position : 185177 - 186475 bp
Length : 1299 bp
Strand : +
Note : -

DNA sequence :
ATGACAGTCAGATTGGATTTGGCAGGGATCGGTGTTGGTCCCTTTAACCTAAGCATAGCGTCGCTTTTGGAGCCTCAAAA
ACACATTAATGCGACCTTTTTTGAAAGTCGAGAGTCTTTTGCTTGGCACCCCGGCTTGTTACTTGATAACACCAATATGC
AGACGATGTTTTTAAAAGACTTAGTTAGTGCGGTGTATCCAGAAAGTCCTTACTCTTTTTTATCTTATTTAGTGAAGAAT
AAGAAATTCTATCGGTTTTTATCCGCAGAATTAAGTTGTATTAGCCGTCATGAGTTTTCAGATTATTTGGCATGGGTTTC
TCAGCAATTAAGTAATGTGAAATTCTCAACCCATGTTGAGAATGTTGAATTTAACGGTGATTCGTTTGAAATCCAAACGA
CGAATGGAGTGTATGAGGCGAAAAACTTATGCATTGGCACTGGTAAGGTTCCTTTTATTCCAGAGTGTGCCGTTCCACAT
ATAGGTCCAAGTGTTTTTCATGCTGCGGAGATGGGATTACGTTCTCGTGATTTTACGAATAAGCGTGTTGTGATTGTGGG
TGGTGGACAAAGTGGTGCAGACATATTTTTAAATGTGCTGCGAGAAAAATGGGGTAAACCTGCCTCATTAGATTGGGTTT
CACGACGTTCTAATTTTCAGCCATTAGATGAAGCATCATTTACTAATGAATTTTTTACTCCTGATTATGTGAATGCGTTT
GTTAACTTGGCTCCGAATGTTAAACAATCAGAAATTGAGGCTCAAAAACTCACTTCAGACGGCATAACTCAACTTGCACT
ATTAGACATATATCGAGAGTTATATCATCGTTTTGATGTATTAAAAGAAGATAAATGGGTTCGTTTGTTACCACATAGAA
CGATGAATTCATTGAATATTAATGAGTCTGAATTTTCGCTAGGTATTCATAACGCATTAAGCCAGCAGTTAGAAATACAT
CAAGCGGACATTGTTATTTTAGCGACTGGTTTTAAGTCTCCTTATCCAGCTTGTTTAAACTCCATCCTTCCTTTGTTGGA
TCTTGATGAACAAGGTCGATATCAATTAACGCCTGAATTTGAATTGAAATGGAAAGGCAGTAAGAACAATAAGATATTTG
CTGTTAATGCCGGTATGCATAGTCATGGTATTGCAGAGCCTCAGCTGAGTTTAATGGCATGGCGTAGTGCTCGTATTATT
AATCAGTTAACAGGAGCTGCGGTGTATGACATTGCGTCTAATCCCGGAATGATTGATTGGATCTCCGAACCAAAGGTATG
CGAACCCACAACCGTGTAA

Protein sequence :
MTVRLDLAGIGVGPFNLSIASLLEPQKHINATFFESRESFAWHPGLLLDNTNMQTMFLKDLVSAVYPESPYSFLSYLVKN
KKFYRFLSAELSCISRHEFSDYLAWVSQQLSNVKFSTHVENVEFNGDSFEIQTTNGVYEAKNLCIGTGKVPFIPECAVPH
IGPSVFHAAEMGLRSRDFTNKRVVIVGGGQSGADIFLNVLREKWGKPASLDWVSRRSNFQPLDEASFTNEFFTPDYVNAF
VNLAPNVKQSEIEAQKLTSDGITQLALLDIYRELYHRFDVLKEDKWVRLLPHRTMNSLNINESEFSLGIHNALSQQLEIH
QADIVILATGFKSPYPACLNSILPLLDLDEQGRYQLTPEFELKWKGSKNNKIFAVNAGMHSHGIAEPQLSLMAWRSARII
NQLTGAAVYDIASNPGMIDWISEPKVCEPTTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-116 50
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-116 50
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 1e-116 50
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-115 50
iucD AAD44749.1 IucD Virulence SHI-2 Protein 1e-116 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucD YP_206122.1 aerobactin siderophore biosynthesis protein IucD VFG0618 Protein 7e-117 50
iucD YP_206122.1 aerobactin siderophore biosynthesis protein IucD VFG1084 Protein 1e-115 50
iucD YP_206122.1 aerobactin siderophore biosynthesis protein IucD VFG0937 Protein 5e-117 50