Gene Information

Name : ribD (VF_0700)
Accession : YP_204083.1
Strain :
Genome accession: NC_006840
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 768141 - 769259 bp
Length : 1119 bp
Strand : +
Note : -

DNA sequence : 
ATGACATTTACTACCCAAGATCATCTGATGATGCAAAAAGCTATCTTATTAGCTAAGCAAGGCATTTATACCACAGCCCC
TAATCCAAATGTGGGGTGTGTATTGGTTAAAAATGGGAAGATTATTGGGGAAGGGGCGCACTTAAAAGCAGGTGAACCCC
ATGCTGAAGTCCATGCATTAAGACAAGCAGGAAAAGAAGCGCAAGGGGCAACGGCTTATGTGACGCTTGAACCTTGCTCT
CATTATGGACGCACACCACCTTGTGCTGAAGGACTTATAAAAGCGGGCGTAAAAAAAGTAATTTGTGCGATGGTTGATCC
AAACCCTCAAGTTGCTGGTCGTGGTCTTGCTATGTTAGATGAAGCTGGAATTGAAACCGCATCAGGTCTGCTTGAAGCCG
ATGCTAGAGCCTTAAACCCTCACTTTTTAACTCGAATGGAAACTGGAAAACCATTTGTACAGTTAAAAATGGCAGCGAGT
CTTGATGGAAAAACCGCATTAAAAAATGGAGTGAGTCAATGGATCACTTCAAAAGAAGCAAGACAAGATGTTCAACGCTA
TCGTGCACAATCTGGTGCAATACTCTCAACAGCGAAAACCGTGATTGATGATGACGCCTCATTAAATGTGCGTTGGAGTG
ATCTTCCTCCCTCAATTCAAGAAAGCTACCAACAAGCGTCTATTCGACAGCCAATGCGTTTTATTTTAGATCGTCAGCAT
TCATTAACATCTGATTTAAAACTGTTTCAAGCCTCTGATGAAGTAGTTACGATCTCATCTCAAAACACACATCCAATAGG
GACTTCTGAAAATCATATGCAATGCCGTGTTGATGATGGTCAATTGGATCTTAAAGAAGTCGTAAATAAAATTTCTCGTG
ATTTTAATGTAAATCATATTTGGGTAGAAGCCGGTGCGACATTAGCAGCAAGTATGATTAACGATAATTTAGTTGATGAA
TTGATTATTTATCTCGCCCCTAAATTAATGGGAGCGGATGGGCGTAGTATCATTAATTTAATTGGATTAGAAACGATGTC
TGAGGCAATTGACTTGGATATAAAAGACATACGTATGGTCGGTAAAGATATTCGAATTACCGCAACAATAGCAAGGTAA

Protein sequence : 
MTFTTQDHLMMQKAILLAKQGIYTTAPNPNVGCVLVKNGKIIGEGAHLKAGEPHAEVHALRQAGKEAQGATAYVTLEPCS
HYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLDEAGIETASGLLEADARALNPHFLTRMETGKPFVQLKMAAS
LDGKTALKNGVSQWITSKEARQDVQRYRAQSGAILSTAKTVIDDDASLNVRWSDLPPSIQESYQQASIRQPMRFILDRQH
SLTSDLKLFQASDEVVTISSQNTHPIGTSENHMQCRVDDGQLDLKEVVNKISRDFNVNHIWVEAGATLAASMINDNLVDE
LIIYLAPKLMGADGRSIINLIGLETMSEAIDLDIKDIRMVGKDIRITATIAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-67 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-67 46