|
Name : kdsD (VF_0392) Accession : YP_203775.1 Strain : Genome accession: NC_006840 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 424729 - 425703 bp Length : 975 bp Strand : - Note : - DNA sequence : ATGGCAACTCAGTTTGATTTCTGCAAAGCAGGAAAAAATGTTCTTCAAATTGAAATCGATGCTCTTACCCAACTCAGCAA TTACATTAACGATGACTTCACTAAAGCGTGTCAATTAATGCTTGAATGCAAGCAAAAAGTCGTTGTTATGGGAATGGGTA AATCAGGTCACATTGGTAATAAGATTGCAGCTACCTTAGCAAGTACAGGCACTCCCTCTTTCTTTGTACACCCTGGCGAA GCAAGCCATGGTGATTTAGGCATGATTGAAAAAGGCGATATTGTTATTGCTATTTCTAACTCAGGTGAAGCGTCTGAAAT TCTTGCTTTACTGCCAGTAATTAAACGTTTAGGTATCACTTTAATTACAATGACAGGTAAACCGGAATCTAGCATGGCAA AAGTCGCTGATGTGAACCTTCAAATTACGGTTCCTCAAGAAGCTTGCCCTCTTGGTTTAGCGCCAACATCAAGTACAACA GCAACCCTTGCTATGGGAGACGCTTTTGCTGTTGCGCTTCTTCAAGCAAGAGGCTTTACTGCTGATGACTTTGCTTTATC ACATCCAGGTGGCGCTTTAGGTCGTAAATTACTACTCTTATTATCAGACATCATGCATACAGGTGATGAATTACCAATGG TTACGGCTGATGCTCTTATTAAAACAGCACTTTTAGAAGTGTCTGAAAAAGGGTTAGGAATGACAGCTATCGTTGATAAC GAGCAAAAAGTAATTGGTATCTTCACTGATGGTGATTTACGTCGCCTTTTAGATAATAAGATCGATATCCATACTCAAAC TATTGGAGAAGTAATGACACACTCTCCAGCGGTTGCTAATCCAAACTTACTTGCTGTTGAAGGTCTAAACCTAATGCAAG ATAAGAAAATAAATGGATTATTACTTTGTGATGAAACTCATCGTTTAGTTGGTGCATTGAATATGCATGACTTATTAAAA GCGGGAGTGATGTAA Protein sequence : MATQFDFCKAGKNVLQIEIDALTQLSNYINDDFTKACQLMLECKQKVVVMGMGKSGHIGNKIAATLASTGTPSFFVHPGE ASHGDLGMIEKGDIVIAISNSGEASEILALLPVIKRLGITLITMTGKPESSMAKVADVNLQITVPQEACPLGLAPTSSTT ATLAMGDAFAVALLQARGFTADDFALSHPGGALGRKLLLLLSDIMHTGDELPMVTADALIKTALLEVSEKGLGMTAIVDN EQKVIGIFTDGDLRRLLDNKIDIHTQTIGEVMTHSPAVANPNLLAVEGLNLMQDKKINGLLLCDETHRLVGALNMHDLLK AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-49 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-49 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-49 | 42 |
