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Name : gspD (VF_2474) Accession : YP_205857.1 Strain : Genome accession: NC_006840 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2770227 - 2772248 bp Length : 2022 bp Strand : - Note : - DNA sequence : ATGGGCAAGGGAGCCTTATTACTTGCAAGTAGCATGATGTGGACATCAGCAATTGCAAATGACTTTAGTGCCAGTTTTAA AGGGACAGACATTCAAGAGTTTATCAATATTGTTGGTCGTAACTTAGAAAAGACCATCATCGTTGATCCGTCTGTTCGTG GGAAAGTCGACGTTCGTAGTTACGATTTATTAAATGAAGAGCAATATTATCAATTCTTCCTTAGCGTACTTGAAGTATAT GGGTACGCTGTGGTTGAGATGGACTCTGGTATTTTAAAAGTCATTAAAGACAAAGACGCGAAAACATCGGCGGTTCCTGT TCTTGGTGCAAAAGATCAAGTAAAAGGCGATGCAGTGATTACTCGTGTTATCGCTGTTCGTAACGTGTCTGTTCGTGAGC TTTCTCCTTTGCTTCGCCAACTTAATGATAATGCCGGTGCAGGTAACGTCGTTCACTATGACCCTGCAAATATTATTATG ATCACAGGTCGTGCAGCGGTGGTTAACCGTTTAGCTGAAATTATCGAGCGTGTTGACCGTGCTGGCGATAAAGAAGTGGA AGTGGTGGAGTTGAATAACGCATCAGCGGCTGAAATGGTGCGTATTGTTGATGCTCTAAATAAAACCACAGATGCGAAGA ATACCCCTGCATTCTTACAGCCTAAATTGGTTGCAGATGAACGTACTAACTCGATTTTAATTTCGGGTGATCCAAAAGTA CGTAATCGTCTAAAGAAACTCATTAAGCAGCTTGATGTCGAGATGGCCACCAAAGGGAATAATCAGGTCATCTATTTACG TTATGCAAAAGCCGAAGATTTGGTTGATGTGCTAAAAGGTGTGTCAGATAACCTAGCGGCAAGTAAAGGTACTAAGCAAA AAAGCAGTTCACAAAATCGCAATGATGTGATGATTTCTGCACACGTTGATACGAACTCATTAGTGATCACAGCGCCGCCT GATGTGATGCGTGCAATGAAAGATGTGATTGCTCAGTTGGATATCCGTCGTGCTCAAGTCTTGATTGAAGCCTTAATTGT AGAATTAGCCGAAGGTGATGGCGTAAATTTAGGTGTGCAGTGGGGTAACTTAGAAACCGGTACCATGATCCAATACAGCA ATACAGGGGCGTCAATTGGTGCCACCATGGTTGGTTTGGAAGAAGCGAAAGACAAAACGACAGCAACTGCGGTTTACGAT GAAAATGGTAAATTTTTACGGAATGAAACCACGACAAAAGAAGGTAGCTATGATGCACTAGCAGGTGCTCTTGGTGGCGT TCAAGGTGCAGCAGTAAGTATCATGATGGGTGATTGGAAGGCTCTTGTTACCGCGGTATCGACCGACTCTAACTCTAACA TTCTTTCATCTCCAAGCATTACGGTGATGGATAATGGCGAAGCGTCATTTATTGTGGGTGAAGAGGTTCCTGTATTAACC GGTTCAACATCGGGTTCAAATAATGAAAACCCATTCCAAACCGTTGATCGTAAAGAAGTGGGTATCAAACTAAAAGTGGT ACCACAAATTAACGAAGGTGATTCTGTTCGTTTAGATATCGAACAAGAAGTTTCTAATGTATTAGGTGCTAACGGTGCTG TGGATGTGCGTTTTGCAAAACGTCAACTTAATACTTCGGTAATGGTACAAGATGGCCAAATGCTGGTATTAGGTGGTTTG ATTGATGAGAGAGCGCTTGAGAGTGAATCAAAAGTTCCATTCCTAGGTGATATCCCTGTATTAGGTCACCTGTTCAAATC AACCAGCACTCGGGTTGAGAAGAAGAACCTAATGGTATTCATTAAGCCAACCATTATTCGTAACGGTATGACTGCGGATG GTATTACTCAGCGTAAATATAACTACATTCGAGCAGAGCAGTTATACAACGCAGAGAAAGGCTTAAAACTGATGGATGAT GCGAACATTCCGGTATTACCTAAATTTGGTAAAGAATTAGATCATCCAGCCGAGATTCAAGCGTTTTCTGAGCAATTTGA TGATGAGAAAAAGGAAAAATAA Protein sequence : MGKGALLLASSMMWTSAIANDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKVDVRSYDLLNEEQYYQFFLSVLEVY GYAVVEMDSGILKVIKDKDAKTSAVPVLGAKDQVKGDAVITRVIAVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIIM ITGRAAVVNRLAEIIERVDRAGDKEVEVVELNNASAAEMVRIVDALNKTTDAKNTPAFLQPKLVADERTNSILISGDPKV RNRLKKLIKQLDVEMATKGNNQVIYLRYAKAEDLVDVLKGVSDNLAASKGTKQKSSSQNRNDVMISAHVDTNSLVITAPP DVMRAMKDVIAQLDIRRAQVLIEALIVELAEGDGVNLGVQWGNLETGTMIQYSNTGASIGATMVGLEEAKDKTTATAVYD ENGKFLRNETTTKEGSYDALAGALGGVQGAAVSIMMGDWKALVTAVSTDSNSNILSSPSITVMDNGEASFIVGEEVPVLT GSTSGSNNENPFQTVDRKEVGIKLKVVPQINEGDSVRLDIEQEVSNVLGANGAVDVRFAKRQLNTSVMVQDGQMLVLGGL IDERALESESKVPFLGDIPVLGHLFKSTSTRVEKKNLMVFIKPTIIRNGMTADGITQRKYNYIRAEQLYNAEKGLKLMDD ANIPVLPKFGKELDHPAEIQAFSEQFDDEKKEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-161 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-170 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspD | YP_205857.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-157 | 53 |
