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Name : gspE (VF_2473) Accession : YP_205856.1 Strain : Genome accession: NC_006840 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2768728 - 2770227 bp Length : 1500 bp Strand : - Note : - DNA sequence : ATGGCGGATACATTATTTCCTGAATCTAATGCTGTACTTCGTTTACCTTTTTCATTTGCAAAAAGGCATTCGGTAGTTAT CGAATTAAGTACTAATGGATGGGTGCTGTACTATGTATCAGCCCCTTCTTCTATGGTGCTGTGTGAGATTCGCCGTGTAT GTCAATCTGGTTTTTCATTAATTCAATTAACTAAAGATGAGTTTGATACCAAGTTAACTCAGGTATATCAACGTAACTCA TCAGAAGCTCAACAGTTAATGGAAGATATCGGTGCTGATAGTGACGATTTCTTCTCATTGGCAGAAGAGTTACCAAATAA TGATGATTTACTAGAATCAGAAGATGATGCGCCAATCATTAAATTAATCAACGCCATGTTAGGTGAAGCGATTAAAGAAG GTGCGTCGGACATTCATATTGAAACGTTTGAAAAAGTATTGTCGATTCGTTTCCGTGTCGATGGTGTGTTGCGTGATGTA TTAAGCCCAAGTCGTAAGTTAGCGCCATTATTGGTATCTCGTGTAAAAGTGATGTCGAAATTGGACATTGCTGAAAAACG AGTCCCGCAAGATGGTCGTATTTCATTGCGTATTGGTGGTCGTGCTGTTGATGTGCGTGTATCAACCATGCCGTCATCGC ATGGGGAGCGTGTGGTAATGCGTTTATTGGATAAGAATGCGACGCGACTGGACTTAAACAGTTTGGGCATGTCGCCTGAA AACCATAAAAACTTTCAGCATATTATTAAACGCCCACACGGTATTATCTTGGTTACTGGCCCAACCGGTTCTGGTAAATC AACTACCTTGTATGCGGGCTTAGGTGAATTAGATAGCTCTCAATCCAATATTTTAACCGTTGAAGATCCGATCGAATTTG ATATCGATGGCATTGGTCAAACACAAGTAAATCCAAAAGTAGACATGACGTTTGCTCGTGGTTTACGTGCCATTCTTCGT CAAGACCCTGATGTGGTGATGATAGGTGAGATCCGTGACTTAGAAACCGCAGAAATTGCAGTTCAAGCATCATTAACCGG TCACTTAGTTATGTCAACATTGCACACCAATACCGCGGTGGGTGCGATTACACGTCTTCGTGATATGGGTATTGAACCTT TCTTAATTTCATCTTCATTACTTGGTGTACTTGCACAGCGTCTAGTTCGAACTCTGTGTGGTGAATGTAAAGAGGCGTAT CAAGCGGATGAAGAGCAGAAGAAATTGTTTTCTCTTTCTGCAAGAGATGAGCTCACACTTTATAAACCAGTGGGTTGTGA ACACTGTAATGGTAAAGGTTATCGTGGTCGTACCGGTATTCATGAACTTTTAGTGGTTAATGAAAAAGTACAAGAGTTGA TTCACAAAGAAGTGGGTGAACAAGCGATAGAAAAAGAAGTAAGAAAGTCGACTCGCAGTATTCAACAAGACGGCTTATTA AAAGTACAAAAAGGAATAACCACATTAGAAGAGGTGATGCGAGTCACTCGGGAAGGTTAG Protein sequence : MADTLFPESNAVLRLPFSFAKRHSVVIELSTNGWVLYYVSAPSSMVLCEIRRVCQSGFSLIQLTKDEFDTKLTQVYQRNS SEAQQLMEDIGADSDDFFSLAEELPNNDDLLESEDDAPIIKLINAMLGEAIKEGASDIHIETFEKVLSIRFRVDGVLRDV LSPSRKLAPLLVSRVKVMSKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLNSLGMSPE NHKNFQHIIKRPHGIILVTGPTGSGKSTTLYAGLGELDSSQSNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILR QDPDVVMIGEIRDLETAEIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCGECKEAY QADEEQKKLFSLSARDELTLYKPVGCEHCNGKGYRGRTGIHELLVVNEKVQELIHKEVGEQAIEKEVRKSTRSIQQDGLL KVQKGITTLEEVMRVTREG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-154 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-154 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_205856.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-152 | 63 |
| gspE | YP_205856.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-142 | 62 |
| gspE | YP_205856.1 | general secretion pathway protein E | VFG1876 | Protein | 7e-133 | 56 |
| gspE | YP_205856.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-92 | 46 |
| gspE | YP_205856.1 | general secretion pathway protein E | VFG2426 | Protein | 3e-75 | 44 |
