|
Name : fliP (VF_1842) Accession : YP_205225.1 Strain : Genome accession: NC_006840 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2074971 - 2075840 bp Length : 870 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCTAAAAACTAATTTTATTGCCGCCGTTTTGGCGGCATTTTCACTCTTCTTTATGGCATCTCCTGCTTGGGCGGTAGA TGATCTCGCTTCTTCTATTCCTCAAACTGCCGCTAGTGCTGAAGGCATGACGGTTACTGCTATGGAAAAAGAGGCTGGAG CAGCAAAAACCATAGCAAAAGGCAGCAGTTCTGGTAGTGGTATCCCTGCATTTACCATGACAACCAATGCCAATGGTGGT GAAGATTATTCTGTAAATTTACAGATTTTAGGTCTAATGACCATGTTGGGCTTTTTGCCTGCAATGGTTATTTTAATGAC CTCTTTTACCCGTATTGTCGTTGTGATGTCGATTTTGCGTCAAGCTATGGGTTTACAACAAACGCCATCAAACCAAGTTA TTATTGGTATTGCGATGTTTTTGACGTTTTTCATCATGGCTCCGGTGTTTGATAAAGTAAATAACACGGCGATTCAACCT TATATCAATGAAGAAATCACAGCTCGTGAAGCGTTTGATGTTGCACAGGTTCCGATGAAAGAGTTCATGCTAGCTCAAAC ACGAGTAAAAGATTTAGAAACCTTTGTAAATATGTCGGGTGTTGAAGCTGAAAACCCAGAAGATGTGCCAATTACAGTGG TTATTCCGGCGTTTATTACTTCAGAGCTAAAGACTGCTTTCCAAATAGGTTTCATGCTTTTCTTGCCGTTCTTGATCATC GATTTAGTGGTGGCATCGGTATTAATGGCAATGGGTATGATGATGCTTTCTCCAATGATCGTATCATTACCGTTTAAGTT AATGTTGTTTGTATTAGTGGATGGTTGGAATTTGATCCTATCCACCCTCGCAGGCAGTTTTGCAACTTAA Protein sequence : MLKTNFIAAVLAAFSLFFMASPAWAVDDLASSIPQTAASAEGMTVTAMEKEAGAAKTIAKGSSSGSGIPAFTMTTNANGG EDYSVNLQILGLMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIAMFLTFFIMAPVFDKVNNTAIQP YINEEITAREAFDVAQVPMKEFMLAQTRVKDLETFVNMSGVEAENPEDVPITVVIPAFITSELKTAFQIGFMLFLPFLII DLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-24 | 42 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 6e-25 | 41 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 6e-25 | 41 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_205225.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-64 | 68 |
| fliP | YP_205225.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 6e-59 | 61 |
| fliP | YP_205225.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 8e-53 | 56 |
| fliP | YP_205225.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 5e-49 | 55 |
