Gene Information

Name : kpsF (VF_0179)
Accession : YP_203562.1
Strain :
Genome accession: NC_006840
Putative virulence/resistance : Virulence
Product : arabinose-5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 197437 - 198369 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTAGTTCAATTGATATTGCAAAACAAGTAATTCAAACCGAAATTGAAGGGTTGGATTATATGGCAAAAAGATTAGG
TTCTGAATTTGAGGTGGCGATAAATGCCATCATTAATACAAAAGGTCGCACTATAATTTGTGGGATGGGAAAATCAGGAA
TTATCGGAAAAAAAATAGCAGCGTCTTTTGCTAGTACTGGTACTCCTAGTTTCTTTATGCATCCTGGAGAGGCTTTTCAT
GGCGATCTTGGAATGGTGAAACCAGAAGATGTATTTATTGCTATATCGAATTCGGGTGAAACTGATGAAGTTTTAAAACT
GTTACCTTTCTTACGTGATAACGGTAACTTTGTTATTGCTATAACAGGTAAAGAAAACTCTACACTTGCTACAAATTCTC
ACTGTCATTTAGATATTTCTGTGCCTAAAGAGGCGTGTCCTTTGCAATTGGCACCAACATCGTCAACAACAGCAACTCTT
GTTATGGGGGATGCCTTAACGGTTGCTTTGATGGATGTTCGTGAATTCCAACCTGAAAACTTTGCTCGTTTTCACCCAGG
AGGTAGCTTAGGTCGACGATTATTGTCAAAAGTTCAAGATGAAATGTTTTCTGACAATATCCCAAGTGTCGCTTCAGATG
CAGATTTCACTTCTATCATTCATAAAATATCCTCAAGTCATCTAGGACTTACATTGGTTAATTTAAAGGATGATTCTTTA
GCTATCATCACTGATGGTGACTTGCGCCGAGCTATGGAATCAAAGGGGAGAGACGCTTTTGATTTGGTAGCAAAAGATAT
TGCATCAATTAATCCTGCCTCTATATCACCTGAGTCTAATATACAAAAAGCTTACGAGATCATGGAGAGTAAAGGGATAA
CATCATTGATTGTTGTTGAAAGTAATTCTGTTGTTGGTATTTTGAAAAAGTAA

Protein sequence : 
MASSIDIAKQVIQTEIEGLDYMAKRLGSEFEVAINAIINTKGRTIICGMGKSGIIGKKIAASFASTGTPSFFMHPGEAFH
GDLGMVKPEDVFIAISNSGETDEVLKLLPFLRDNGNFVIAITGKENSTLATNSHCHLDISVPKEACPLQLAPTSSTTATL
VMGDALTVALMDVREFQPENFARFHPGGSLGRRLLSKVQDEMFSDNIPSVASDADFTSIIHKISSSHLGLTLVNLKDDSL
AIITDGDLRRAMESKGRDAFDLVAKDIASINPASISPESNIQKAYEIMESKGITSLIVVESNSVVGILKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-54 46
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-54 46
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-54 46