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Name : potB (VF_1316) Accession : YP_204699.1 Strain : Genome accession: NC_006840 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1464516 - 1465373 bp Length : 858 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAACAAGAAGTTTAATCTCCAAAATATCATCATCACAATTATTGTTAGTTGGTTACTGCTGTTCGTTTTCATTCCAAA TGTAATGATCATCGGTACTAGCTTCTTAACTCGTGATGAAGCAAATTTAATCGAAATGACGTTTACGATGGATAACTATC TACGTCTTTTTGATCCACTATATGCAAAAGTGCTGTGGCATTCATTTTATATGGCCATTGTTGCAACGTTAATCTGTTTG GTTGTGGGTTACCCATTTGCCTACATCGTTGCAAAAATGCCTGAAAGATGGCGCCCATTTATGCTGTTTTTAATTATTGT TCCTTTTTGGACTAACTCATTAATCCGTACTTATGGGTTAAAAATTGTGTTAGGTACTCAAGGTATTTTAAATAAAAGCC TAATTGCAATGGATATCATCGATAAACCATTACGTATTATGTACACAGAAACAGCAGTAATGATTGGTTTAGTTTACATT CTATTACCTTTCATGATTTTGCCACTGTATTCAGCAATTGAAAAACTTGACGGTACTTACTTAGAAGCGGCTCGTGATCT AGGTGCAAACAAACTTCAAACTTTGTGGAAGATTGTATTGCCACTAACAATGCCAGGTATTATTGGCGGTTGTTTATTAG TGTTACTTCCAGCTCTTGGAATGTTCTATATTTCTGACCTATTAGGTGGTGCGAAAAACCTACTAATTGGTAACGTAATT AAGAGCCAAGTATTGAACGCACGTGATTGGCCATTTGGTGCAGCGACCAGTATCGCCCTCACCTTGGCGATGGCATTAAT GCTTTATGCTTACTACCGTGCAGGCAAGTTATTAAACAAAAAGGCGGATCTAGACTAA Protein sequence : MNKKFNLQNIIITIIVSWLLLFVFIPNVMIIGTSFLTRDEANLIEMTFTMDNYLRLFDPLYAKVLWHSFYMAIVATLICL VVGYPFAYIVAKMPERWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNKSLIAMDIIDKPLRIMYTETAVMIGLVYI LLPFMILPLYSAIEKLDGTYLEAARDLGANKLQTLWKIVLPLTMPGIIGGCLLVLLPALGMFYISDLLGGAKNLLIGNVI KSQVLNARDWPFGAATSIALTLAMALMLYAYYRAGKLLNKKADLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 6e-78 | 69 |
