Gene Information

Name : hrpB1 (XOO0086)
Accession : YP_198725.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Virulence
Product : protein HrpB1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 80840 - 81295 bp
Length : 456 bp
Strand : +
Note : -

DNA sequence :
GTGGAGAAGATTCAATGTCCCGGGTCGGTCGTGAGTGGGCTCATCGAGCTGATCACGGTCGGACTCACCCATGAAAAGAT
TCAGGACGCTGCCGCTGTCCTGGCCGCAGTGCGAGTACTGCGGCCAGAGCTGAAAGCGCTGGACACGTTCGATGCATGGA
TTTCGATCAAGCGCGGCAATTACGTGGACGGTGCGCGCCTATTGCGCGAGCTGGAGGGCGACGCCGGCTCCAAGCCTCTG
TGCAGGGCCTTGTACGCCTGCTGTCTGTTCGCGATGGGGGACCCGTCGTGGCATGGCGTTGCAGACGGGCTGATCGAAGA
AGACGCCGATGCCGACGCGGTGGCCTTGGTCAAGGCGCTGTCCGGGCGAACTACCCCAACGTCCGCACCGGCGGACGTAC
CGGTTGAATCGTCAGCACCGATGGAAGTTCCGAATTCGCAGTACCTGCGCGCCTGA

Protein sequence :
MEKIQCPGSVVSGLIELITVGLTHEKIQDAAAVLAAVRVLRPELKALDTFDAWISIKRGNYVDGARLLRELEGDAGSKPL
CRALYACCLFAMGDPSWHGVADGLIEEDADADAVALVKALSGRTTPTSAPADVPVESSAPMEVPNSQYLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB1 BAB07857.1 HrpB1 Virulence Hrp PAI Protein 1e-52 100
hrpB1 AAF61286.1 HrpB1 Virulence Hrp PAI Protein 1e-52 100
hrpB1 YP_198725.1 protein HrpB1 Virulence Hrp PAI Protein 1e-52 100
hrpB1 NP_640762.1 HrpB1 protein Virulence Hrp PAI Protein 2e-51 97
hrpB1 YP_362158.1 HrpB1 protein Virulence Hrp PAI Protein 1e-51 97
hrpB1 AAP34344.1 HrpB1 Virulence Hrp PAI Protein 1e-51 97
hrpB1 AAB08456.1 HrpB1 Virulence Hrp PAI Protein 8e-52 97
XC_3011 YP_244079.1 HrpB1 protein Virulence Hrp PAI Protein 3e-43 84
hrpB1 NP_636605.1 HrpB1 protein Virulence Hrp PAI Protein 3e-43 84