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Name : hrcU (XOO0085) Accession : YP_198724.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 79546 - 80817 bp Length : 1272 bp Strand : - Note : - DNA sequence : ATGCGGACCGTACATGCGGGGCAAGCTACGCGCGCCACGCCGGTCAGATCCTTCCGGAAGCGAATATCGGAAGTCGCTGG CGAACAAATCATTCCGGCTTCGCCAGGCCATCCACACATTCGCCTGGAAAACGGATCGCTCGACCACAGCTCCCCACAAT CGGGGGCGCTGCGATCGCGGAAGGATAAGGCAATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGAT GCGCGCAAGGACGGGGAAGTTCCGGTCAGCCCGGACGTCACTGCAGCCGCGGTGCTCTTCGGCGCGTTATTGGTGATGAA ATCGGCCGGCGATTACTTCGTCGATCACATGCGCGCATTGACGAGGATCGGCTTCGATTTTTCGGAAAACACACGCGATG CAACGGCGATAAACCGTGCACTCGCCCATATCGGCATCCAGGGATTGCTGTTGATGCTGCCGTTCCTGGCTGCGTGCCTG GTGGCTGGCTTGGTAGGCGGTGCGTTTCAGACGGGCCTGAACGCCTCGCTCAAGCCGGTGTCGCCCAAGTTCGATTCGCT CAATCCCGCAAACGGGGTCAAGAAACTTTTTTCGTTGAGAAGTCTCATCAATCTACTGAAGTTGATCATCAAGGCCATCC TGATTGGCGTGGTGCTGTGGGTCGGTATCCGCACCCTCATGCCGATGATCATTGGGCTTGCCTACGAGACACCGCTTGAC ATTTCCCAAATTGCCTGGCGAACCCTGAGCATGCTCTTCGCACTGGGCGTGCTGCTGTTCATACTGGTCGGCGCTGCAGA CTGGAGCGTGCAGCACTGGCTGTTCATCCGCGACAAGCGAATGAGCAAGGACGAGCAGAAGCGCGAATACAAGGAAAGCG AGGGCGACCCCGAAATCAAGGGCAAACGCAAGGAATTCGCCAAGGAACTGGTCTTCGGCGACCCCCGCCAACGCGTCGCC AAGGCCAAGGTGATGGTGGTCAACCCGACCCATTACGCGGTGGCATTGGCCTACGAGCCCGATGACTTCGGCTTGCCGCA GGTCGTTGCCAAGGGCGTAGACGATGGCGCGCTGGAACTGCGCGCCTTTGCGCATAACCAGGGCATTCCGATCGTTGCCA ATCCGCCACTGGCACGTGCGCTGTATCAGGTGGAATTGGGCGACGCAATCCCCGAGCAATTGTTCGAAACGGTTGCGGTG GTGTTGCGCTGGGTCGATGGACTCGGTCGCGACCACGGCGACGGCGACGGCAATGGAGCCCTGCCATGCTAG Protein sequence : MRTVHAGQATRATPVRSFRKRISEVAGEQIIPASPGHPHIRLENGSLDHSSPQSGALRSRKDKAMSEEKTEKPTEKKLRD ARKDGEVPVSPDVTAAAVLFGALLVMKSAGDYFVDHMRALTRIGFDFSENTRDATAINRALAHIGIQGLLLMLPFLAACL VAGLVGGAFQTGLNASLKPVSPKFDSLNPANGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIRTLMPMIIGLAYETPLD ISQIAWRTLSMLFALGVLLFILVGAADWSVQHWLFIRDKRMSKDEQKREYKESEGDPEIKGKRKEFAKELVFGDPRQRVA KAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGVDDGALELRAFAHNQGIPIVANPPLARALYQVELGDAIPEQLFETVAV VLRWVDGLGRDHGDGDGNGALPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 8e-160 | 100 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 8e-130 | 99 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-123 | 94 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-122 | 93 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 7e-122 | 92 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-106 | 83 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-106 | 83 |
