Gene Information

Name : hpaP (XOO0083)
Accession : YP_198722.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Virulence
Product : hrpC3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 76974 - 77618 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence :
GTGATGCGCAAGCTGCCCCTCCGCCATGTGCGCATCCTGCCGGTCAGCGGCGCACTGCAGCGGCCGGCGACTCCAGCCAC
GCCAGCTCGGTCGGCGCAGCGTTCCAGCTTCCTGCAACTGCGCCAGCGCCTGCGCAGCGTAGAGCTCGCGCTTCCCTGCA
TGGTGTTGCCACCACAGTGCGACGACGAGGATCGACCGGAGCCTGATGCCGAGGAGCGCTTCACTGAGGCGCGTGACAGC
GCGCCCGTACAAACGGACCCGCCATTACGTCTCGATGGGCCGAAACACCGAGAGCCGCCCCAAGGCAACGACAATGGCGC
CGTGGGGCGACAGATCGCGACCGAGTGGATACGCACGCAACGCGCCCAAATGGCGATCGACCACATCGCGCTGCGAGTGG
CCGATTTCTGCAACGCCAAGCCCGTGCGCAGCGCAGGGAGCTGGGAAGCGTGGCTGGATATCGATCAAGAGGTCGTCGCA
CAGACGACGTTGTTTTTGCGACTTTCGCCACACCAGCTATCGCTTCGCTTCAATACCAGTTCGCCAGACGCGCGCGAGGT
ACTTTGGTGTGGAAGGCAGCGCCTGGAGGCTGCACTGACGTCAACACTGAGTAGCACGCTCCAGATCAGCATCGAGGTCG
TCTAA

Protein sequence :
MMRKLPLRHVRILPVSGALQRPATPATPARSAQRSSFLQLRQRLRSVELALPCMVLPPQCDDEDRPEPDAEERFTEARDS
APVQTDPPLRLDGPKHREPPQGNDNGAVGRQIATEWIRTQRAQMAIDHIALRVADFCNAKPVRSAGSWEAWLDIDQEVVA
QTTLFLRLSPHQLSLRFNTSSPDAREVLWCGRQRLEAALTSTLSSTLQISIEVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaP YP_198722.1 hrpC3 Virulence Hrp PAI Protein 3e-70 100
hpaP BAB07860.1 HpaP Virulence Hrp PAI Protein 1e-64 99
hpaC YP_362155.1 HpaC protein Virulence Hrp PAI Protein 3e-62 86
hpaP AAP34347.1 HpaP Virulence Hrp PAI Protein 8e-55 83
hpaP NP_640759.1 HpaP protein Virulence Hrp PAI Protein 9e-55 82