Gene Information

Name : XOO0827 (XOO0827)
Accession : YP_199466.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 843573 - 844559 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence : 
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTTCAGAACGACCTGATCAAGGATGCGTTGCAAAAACAATGGTGAGCGCACCGGCGC
GTCGTGCGCTGGTGCGCGAGTGGATCGACGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATCGCCCGCGCGAGGACCGCAACGTTGAGCTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGCCTCGTGCACTATAAGCGGGTGGAGCGGCTGTATT
GCGAGCAGCAGCTGCAGGTCCGCGGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCCGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGTCGGGCGATCAAGTCTCTGGTGATCTT
GGACGACGCGACACACCAGGCAGTCGCCATCGACGTGGAACGCGCCATCTCCGGCCACGGGGTAGCACGCGTGCTGGATC
GGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACGGACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAA
CGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGCGGAATGACGCCGGTGGCCTATGCCCAGCAGTTGGCCAAT
AGCGATATCATCAACCCCAGACTCTAA

Protein sequence : 
MAQQVRRHERARCQAAQGPGGREHATEEVAGRAGVSERPDQGCVAKTMVSAPARRALVREWIDGGASERCALAAIGMSAS
ALRYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVHYKRVERLYCEQQLQVRGRTRKKVPVGERAPLLRPT
KANPVWSMDVVFDRTAEGRAIKSLVILDDATHQAVAIDVERAISGHGVARVLDRLAHSRGLPKMIRTDNGKEFCGKAMVA
WAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGGMTPVAYAQQLAN
SDIINPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-55 51
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-35 41