Gene Information

Name : hrpD5 (XOO0078)
Accession : YP_198717.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Virulence
Product : protein HrpD5
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 73273 - 74211 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
ATGACCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCACCAGGTCGCTACACCCTGGG
GAGTGATCCCCAAACCGATATACGAATAGACGATTGGCCTGGTTGCTCACTCAGTATCGAGGTAGACCAAGATGGGCAGA
TCCGCTATAGCAGCGACACGTTGCCAGAAACGTCCTTCGTTGCGTTTCAGCCAGTGCGCTTCGGCCCGTTGGTGCTATGC
GTTGGCGATGCTGGTGCCGATTGGCCGGACGATGTGGCGTTGCTGGAGCGGCTGCTTTCCCCAGCACCGCCACCAGCGCC
GCGCACGTCCAGGCGCAACATCGTGCGTACTGCGGTGGGCGCCGTGCTAGCACTTGCAGCCGCGGCGTTGCTCCCCTCGT
TGCAGCCCGCGTTTCTGTCCGATGCTGCCGCCCGGCAACATCCGGAAACTGCCGTCAATCAGGCCAAAGGTTTATTGAAG
CAGCTGGGCTTTCGCGAAGCGCATGTTGCACAGGTCGGCACGCGCGTGCTGATCGAAGGCCTGGTGCCAAGCAGCGCCGA
TGCTGCACGCTTGCGTGCGCAGGTGCGTCGCTATCACCCGGGCGTTGCCGTCAACGTGGCCGTGGTGGACGAGGTGGTGG
CGACGCTGCGCGACACCCTGGCTGACCCCGCCCTCAGCGTACGTTACGAGGGCAATGGCGTTTTCTCGGTTTCCGGCAGC
AGCGACTACGCAGAACGTGCAAGCCGCCGGATTGCCGACGTCCGCAGCGACCTGGGCCCCGAGGTCCGCGCGCTGCACGT
GGAGATCAGCCAGCAAGACCCGTCCATAAAAACACCGGATAATTACGACGCGGCATTGCTCGCCGATGACCTGCACTATG
TCGAAACGCCGGATGGTACCAAGCACATGACATCCCTGCCGCAGCAAGCGGCGCAATGA

Protein sequence :
MTMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDTLPETSFVAFQPVRFGPLVLC
VGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVGAVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLK
QLGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGS
SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGTKHMTSLPQQAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpD5 BAB07865.1 HrpD5 Virulence Hrp PAI Protein 2e-105 100
hrpD5 YP_198717.1 protein HrpD5 Virulence Hrp PAI Protein 3e-105 100
hrpD5 AAD21325.1 HrpD5 Virulence Hrp PAI Protein 1e-98 93
hrcD YP_362150.1 HrcD protein Virulence Hrp PAI Protein 2e-98 93
hrpD5 NP_640754.1 HrpD5 protein Virulence Hrp PAI Protein 3e-98 90
unnamed AAP34352.1 HrpD5 Not tested Hrp PAI Protein 3e-98 90
XC_3019 YP_244087.1 HrpD5 protein Virulence Hrp PAI Protein 2e-77 72
hrpD5 NP_636597.1 HrpD5 protein Virulence Hrp PAI Protein 2e-77 72