|
Name : hrpF (XOO0066) Accession : YP_198705.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Virulence Product : HrpF protein Function : - COG functional category : - COG ID : - EC number : - Position : 60777 - 63341 bp Length : 2565 bp Strand : - Note : - DNA sequence : TTGCGCTTTTTTCGCCAAAATAGTTCGTCGGCCAGAGTGCACGTTGCGCAAATGGGCAACATACGTCTACACCGCATGGG CGGATCCGTGCGGCCGTATAAGTATAAACTTATACGAAGGTGCTCTGCCAATTCTGTCATTCGCGAGGCCGCCTATATGT CGCTCAACATGCTTTCTACCGGGAGCAACCCCAGCCAACTGCTGGGCACCTCTTCCAACGAATCGTCTTCATCGGAACTG TTCGGGTCGGATTCGTCCAACGATGGCTCCGACCTGCCATCGACGATGGATACCATCTTTCAGCAAATCTACCTATTGCT GGCGGCCCTTCAGGCCAACACGCAAACCAGTGCATCCGGTGATACGCCGGCCAATACGGCAAGCGGCGATGCTGACACAC AGATGTCCGCATCGGACTGGCAGGCCACCCAGCCGATCGAAAAGCGCACCTCCTGGCCATCCCTGGGCTACGACTTCGAT CCCAAGAACATCAAGGGGAAGGATGCGCCGCCGGCGCTGGAGGGGTCGACGGTTACCTGGAACGATGGCACGCTGACCAA GTCTGAGCTTCAGATCGTTTCGACGCTGAATGCACACAAGGATCAGATGCCGATCGAGTACAAGAATCTCGACGACAAGA TCAACGACCCTTCCACGCCCCCCGACCTGAAGGCTGCATTGCAGGGCCTGAAACAGGACCCGCGATTGTTCTTTGCGATC GGTTCTCAGGGAGACGGCAAGTGCGGCGGCAAGGTCAGTGCGCAGGATCTGTGGGATTTCTCTGATTCACATCCGCAGGT CAAGGACCTGGGCGGAAAGAACGATGAGTTCAATCCCAAGGACATCAAGGGGTCCAACCCGCCACAGGCGGCGGAGGGCT CGACGGTTACCTGGAACGACGGCCAGCTCAATCAATCCGAACTGGAGATTGTTTCGGTTCTGGATCGGCACAAGGACCAG GTCGACTCGCTGTCCTTCGATCAGCTGGATGCCAAGATCAACGACCCGTCGACGCAGCCTGACTTGAAGAAAGCGCTGAA AGGATTGCAGAAGGATCCGCGGTTGTTCTTCGCCATCGGCTCGCAGAAGGACGGCAAGTGCGGCGGCAAGATCAAGGCGC AGGACCTCACAGACTTCTCGTACTACCATCCGCAGATTGCCGAATACAACGACAAGAAGGCAAAGAGCTACACGCAGAAC TACATCGCATCCGATAGCCCCGACAAAACCAAGGCGTCGGTCATGACCAAAAGCGATGCCCTGCGCGAGATGTATCGCTA TTCCGACTATCTGCCCGGCAACCTGAGTGAGGACGAATTCGCCAAGATCGTCGATGGCGACAGCAAGACCGGCAAGTGCC CACCGCAGTTGATCGCGGCTGCTCAATATTTTCGCGATCATCCGGACGAGTGGAAGGAATTTTCAGGAGACGCCGGCACG ATGAGCACGCCGGACTTCCTGCAGAAGTCCACCTCCGAGATGCACCTGACTGCGGACGAGCAGAAGACGCTGGACACCAT CAACAGTCATCAGGACGCGTTCTACGGCGACGGCAAGGAACTCACGCGCGACAAGCTCGACGCGATCTCCAAGGACAACA AGGCCGACCCGGCGGTCAAAGAGGCCGCAACACAGTTGGCGTCCGATCCGCTGCTGTTCGGCTTGTTGAACAACTCGATC ACCGGCTACAAGAAACCCCATCACTTCTTCGGCGGCGGCCATGTCGTCGATTCGGGCAAGATCAGCCAGAACGATTTCCG GCAGTTCTATGACCACATGAGTGCAGCCAACAAGACCGTGAACACGCCGGCCACGCACGAGGCGAGCTCGCCCGATCAGC AAAAGGCCGTCGCGGACATGCTGATGGGCAAGGACGATCCGCCGGCGATCAAGAAGCCCAAAAAGGATGTCGGCACGTTC CAACAGGGCCTGCATGAGTTCCTCAAGTGGGACAGTAAGATCCTGGACTGGATGTCGGTCGGGCTCAGCGCATTGAACGG AATTCCCGTGATCGGCGAGATTGCCGATGCGGCGGCGATTGCATTGGAGAGCGAGGCGCAGGCGGCGCAGGTGGTCGACA CTGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAACATGGCCGGGGCAGTGGTTGGAGCAGTC GGTGGACCCACGGCCAGAATCGGGGCCAAGGGCGCCGCCAAGGGCGTCGCCGAAGTCGCGGCCAAGGAAGCCGCCGAGGG CGCGGCCAAAGGAACTGCAAAGGGAGCTGCCAAAGGCGCAGGTAAAACCGCGGCCGAACGGCCCAGCGCCGCTGCGTTCG CAAAAGGCTACGTGGCCGGCAGCACCATCAGTAAATCGACTGAAATTCTCAAGAAGCCCGTCATGGCGGGCTTGCACTAC GAAGAATATCAGCTGGACAAGCAGAAGGACGGAGAGATCCACCAGAAGCTGGACAACGCCGGCGGCGCCCCGGTGGGTAG GCAGATTATCCCCACAGGCATCGCCGACAACTTCGAGGGAGACGTGCGGCAGAATCTGCGCAATGTCAGGATACGTCGCA GATAA Protein sequence : MRFFRQNSSSARVHVAQMGNIRLHRMGGSVRPYKYKLIRRCSANSVIREAAYMSLNMLSTGSNPSQLLGTSSNESSSSEL FGSDSSNDGSDLPSTMDTIFQQIYLLLAALQANTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFD PKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAI GSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQ VDSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQN YIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGT MSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSI TGYKKPHHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTF QQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAV GGPTARIGAKGAAKGVAEVAAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHY EEYQLDKQKDGEIHQKLDNAGGAPVGRQIIPTGIADNFEGDVRQNLRNVRIRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 93 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 93 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 81 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 79 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 66 |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 66 |
