Gene Information

Name : XOO0599 (XOO0599)
Accession : YP_199238.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : phage integrase family site specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 625987 - 627189 bp
Length : 1203 bp
Strand : +
Note : -

DNA sequence :
TTGGTTGCAGGTTCAAGTCCTGCTGGGCCCACCATCTTTGCTTGCGCTGGCGCGTCGGTACAGTTTCGGTACAGTGGCGG
TACACGAGCCCTGTTCTGGAGCAACCGAATGGCGACCATCGTCAAGACACCCTCAGGCACGTGGAAAGCGCTCGTCCGCA
AGACGGGATGGCCGGCCACAGCCAAGACCTTCCGCACCAAACGCGACGCCGAGGATTGGGCGCGGCGCACCGAAGACGAA
ATGGTGCGCGGCGTCTATATCCAACGTGCGCCGTCCGAGCGCATGACCATCGAGGACGCGCTCAAGCGCTATCTATCCGA
AATCTCACCAACCAAGCGCCCGGCATCGGCCGACAGCGACGCGAGACACGCGAAGCCGCTGATGCAGAACCTGGGCAAGT
ATTCGCTGGCCGCACTGACACCGGAGCTGATCGCCAAGTACCGCGACGACCGGCTCGCTGGCCTGGATCGCAAGGACGCC
AAGGGCAAGCCTGCCCCCAAGCCCCGTTCGCCCAACACGGTACGTCTCGATCTCGCATTGCTCGGCCACCTGTTCAACGT
GGCGATCAAGGAATGGGGGATCGGCCTGACCTACAACCCCGTGCAAAGCATTCGCCGTCCAGCGCCAAGCCCTGGGCGGG
ATCGACGGCTCACGCGAGAAGAAGAAACCCGCCTGATGGCGGCGGTCGATGCTCACTCGAACCCAATGCTCGGCTGGATC
GTGCGCATCGCGCTCGAAACAGGAATGCGTTCTTCGGAGATCACAGGCTTGCGCCGGAACCAGGTCGATCTTGACCGGCG
CGTGGTGCGTCTCCAGGAAACGAAAAACACGATGTCGCGTACCGTTCCTCTGACGGTCGAGGCAACCCGGCTGTTTCGTG
AAGCGCTGAACAATCCGGTGCGCCCCATTGATACCAACCTGATCTTTTTCGGTGAGCCTGGACGTGACAACAAGCGCCGG
GCTTACCAGTTCAATCCGATCTGGACGCGCATCAAGAAGGATGCCGGCGTGCCGGACTTTCGCTTTCACGATCTGCGCCA
CGAAGCCGTCAGCCGTTTTGTGGAAGCAGGCTTGTCCGATCAGGAGGTCGCGGCCATCAGCGGCCACAAGTCGATGCAGA
TGCTCAAGCGCTACACCCATCTGCGCGCGGAGGATTTAGTGGGCAAGCTCGATCAGGTGGTGAAAAAGACAGGAAATCCA
TGA

Protein sequence :
MVAGSSPAGPTIFACAGASVQFRYSGGTRALFWSNRMATIVKTPSGTWKALVRKTGWPATAKTFRTKRDAEDWARRTEDE
MVRGVYIQRAPSERMTIEDALKRYLSEISPTKRPASADSDARHAKPLMQNLGKYSLAALTPELIAKYRDDRLAGLDRKDA
KGKPAPKPRSPNTVRLDLALLGHLFNVAIKEWGIGLTYNPVQSIRRPAPSPGRDRRLTREEETRLMAAVDAHSNPMLGWI
VRIALETGMRSSEITGLRRNQVDLDRRVVRLQETKNTMSRTVPLTVEATRLFREALNNPVRPIDTNLIFFGEPGRDNKRR
AYQFNPIWTRIKKDAGVPDFRFHDLRHEAVSRFVEAGLSDQEVAAISGHKSMQMLKRYTHLRAEDLVGKLDQVVKKTGNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13530.1 site-specific recombinase Not tested PAGI-8 Protein 1e-113 66
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 2e-34 41
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 2e-34 41
rci AAC38070.2 Rci Not tested SPI-7 Protein 2e-34 41