Gene Information

Name : XOO0516 (XOO0516)
Accession : YP_199155.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 538321 - 538797 bp
Length : 477 bp
Strand : -
Note : -

DNA sequence :
GTGTTCGACCGCACCGCCGAAGGTCGGGCGATCAAGTCTCTGGTGATCGTGGACGACGCGACACACCAGGCAGTCGCCAT
CGACGTGGAACGCGCCATCTCCGGCCACGGGGTAGCACGCGTGCTGGATCGGTTGGCACACAGTCGTGGCCTGCCGAAGG
TGATTCGCACGGACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGTGCAGCTACGC
CAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTATGTCGAATCCTTCAACGGCCGGCTACGCGACGAATGCCTCAACGA
ACATGGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACCAACACCGCCCAAAGA
AAGCAATCGGCGCAATGACGCCGGCAACGTATGCCCAGCAGTTGGCCAATAGCGAGATCATCCCCCCCGGACTCTAA

Protein sequence :
MFDRTAEGRAIKSLVIVDDATHQAVAIDVERAISGHGVARVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAHANRVQLR
QIQPGKPNQNAYVESFNGRLRDECLNEHGFPTLLHARTEIERWRREYNQHRPKKAIGAMTPATYAQQLANSEIIPPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 1e-29 53
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 1e-30 52