Gene Information

Name : XOO0478 (XOO0478)
Accession : YP_199117.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 497416 - 498402 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence :
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAACAATGGTGAGCGCACCGGCGC
GTCGTGCGCTGGTGCGCGAGTGGATCGCAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATCGCCCGCGCGAGGACCGCAACGTTGAGTTGTGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACATAAGCGGGTGGAGCGGCTGTATT
GCGAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCCGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGTCGGGCGATCAAGTCTCTGGTGATCGT
GGACGACGCGACACACCAGGCAGTCGTCATCGACGTGGAACGCGCCATCTCCGGCCACGGGGTAGCACGCGTGCTGGATC
GGTTGGCACACAGTCGTGGCCTGCCGAAGGTGATTCGCACGGACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAA
CGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACCAACACCGCCCAAAGAAAGCAATCGGCGCAATGACGCCGGCAACGTATGCCCAGCAGTTGGCCAAT
AGCGAGATCATCACCCCCGGACTCTAA

Protein sequence :
MAQQVRRHERARCQAAQGPGGREHATEEVAGRAGVPERPDQGCAAKTMVSAPARRALVREWIAGGASERCALAAIGMSAS
ALRYRPREDRNVELCERILALAHRHRRYGVGDDLSQAAAGRASREHKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPT
KANPVWSMDVVFDRTAEGRAIKSLVIVDDATHQAVVIDVERAISGHGVARVLDRLAHSRGLPKVIRTDNGKEFCGKAMVA
WAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNQHRPKKAIGAMTPATYAQQLAN
SEIITPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-53 50