Gene Information

Name : XOO4368 (XOO4368)
Accession : YP_203007.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4644820 - 4645341 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence :
GTGCCGGTAGGCGAGCGTGCACCGTTGCTGCGGCCCACCAAGGCCAACCCGGTGTGGTCCATGGACGTCGTGTTCGACCG
CACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGC
GTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACC
GACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATGGTGTGCAGCTACGCCAGATCCAGCC
TGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCC
CAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGC
GTGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAATAG

Protein sequence :
MPVGERAPLLRPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRT
DNGKEFCGKAMVAWAHANGVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIG
VNDAGGLCPAVGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 9e-42 56
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 8e-34 53
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 2e-31 52