Gene Information

Name : XOO4047 (XOO4047)
Accession : YP_202686.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4333283 - 4334209 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence : 
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCAGATGCCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAACAATGGTGAGCGCACCGGCGC
GTCGTGCGCTGGTGCGCGAGTGGATCGACGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATCGCCCGCGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGCCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATT
GCGAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGT
GGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATC
GGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACGGACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTATGTCGAATCCTTCAA
CGGCCGGCTACGCGACGAATGCCTCAACGAACATGGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACGAACACCGCCCCAAAAAACAATCGGCGGAATGA

Protein sequence : 
MAQQVRRHERARCQAAQGPGGREHATEEVAGRAGVPERPDQGCAAKTMVSAPARRALVREWIDGGASERCALAAIGMSAS
ALRYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPT
KANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRTDNGKEFCGKAMVA
WAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHGFPTLLHARTEIERWRREYNEHRPKKQSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 8e-53 52
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-32 42
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 3e-36 41