Gene Information

Name : ybaR (XOO4018)
Accession : YP_202657.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Resistance
Product : sulfate permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 4289531 - 4291060 bp
Length : 1530 bp
Strand : -
Note : -

DNA sequence :
GTGCTGTCCGCAGGCTGTCCTTTCTGTTTCCGGAGTGTCCCCATGTCCTTATTACGTGCCGAATTGGCGCAATGGCGCGC
CTCCCCCGCGCGCGAACTACTGGCCGGTGCGGTGGCAACGTTTGCCCTGATTCCCGAAGTGATCGCATTCGCATTCGTGG
CCGGGGTCGATCCGCAGGTGGGCCTGTTCGCATCTTTCGTGATCGGCATCGTGATTGCGTTATGTGGTGGACGCCCGGCG
ATGATTTCTGCAGCGGCCGGCTCGGTGGCGCTGGTGGCCGCACCGCTGGTGGCCGCGCACGGGCTACCGTATCTGCTGGC
AGCCGGCTTGCTGGCCGGCGCAGTGCAGATTCTGTTCGGGCTATTGCGGCTGGGTGTGCTGATGCGCTTTGTCAGCAGTT
CGGTGCGCACCGGTTTCGTCAACGCGTTGGCGGTGCTGATCTTCGCTGCCCAATTGCCGCATCTGCTGGGTTCCAATCTG
ACCACCTGGGTCATGCTGGGTGTGGGCTTGACCATCATCTATGGCCTGCCGCGTCTGCGCGTGCCGGGGCTGTCGGCAAT
TCCTTCGCCGCTGTGGTGCATTCTGCTGCTCACCGTGGCCAGCACCGCGCTGCATCTGCCGCTCAAGACGGTGGCCGATC
TGGGCAAGCTGCCCAACGCACTGCCGTTCCTGCAATGGCCGGCGGTGCCGCTGACGCTGGAGACGCTGCGCATCATCGTG
CTGCCGGCGCTGGCCATTGCGATGGTGGGTCTGCTCGAGTCGATGATGACCGCGCGCGTGGTCGATGAACTCACCGACAC
GCCCAGCAACAAGAACCGCGAATGCACCGGGCTTGGCATCGCCAACGCGGCCGCCAGTCTGTTCGGCGGGATTGCCGGCT
GCGGCATGATCGGGCAGACCGTGGGTAACGTGAAATACGGCGGTCGTGGCCGGCTCTCTACCTTGTTCGCCGGCGTGTTC
CTGCTGATCCTGATGGTGCTGCTCAAGCCGTGGGTGTCGCAGGTGCCGGTAGTGGCGTTGGTGGCGATCATGGTGATGGT
GTCGGCAGAGACCTTCGACTGGCGCTCGTTGCGCACGGTGGTCACCCACCCGCGCACCTCCAGCGTGGTGATGCTGGCCA
CCGTGGCGGTGACGTTATTCACCGATAATCTGGCGGCAGGCGTGGCGGTCGGCGTGCTGCTGAGCGGGGTGTTCTTCACC
TTCAAGGTGGCGGGGCTGCTGCAGATCACGCACGCCGACAGCGCCGAAGGCGTGCGCACCTACAGCGTGTGCGGGCAGGT
GTTCTTCGCCTCGGCCGATGTGTTCATCGACGCCTTCGACGCACGCGAGGTGCCCGGCCGCGCTGTGGTGATCGATGTCG
GCCGCGCGTACTTCTGGGACATCACCGCGGTGGCGGCACTGGACAAGGTGGTGCAGCGTTTGCGTCATCACGGTCTGGAC
GTGCAGGTGAAAGGCTTGAACGTCGGCAGCAGGCGCTTGATGCAGCGGCACGCCTTGGGCGAGGACGCGCTGGAGTCTGC
TTTGCCCTGA

Protein sequence :
MLSAGCPFCFRSVPMSLLRAELAQWRASPARELLAGAVATFALIPEVIAFAFVAGVDPQVGLFASFVIGIVIALCGGRPA
MISAAAGSVALVAAPLVAAHGLPYLLAAGLLAGAVQILFGLLRLGVLMRFVSSSVRTGFVNALAVLIFAAQLPHLLGSNL
TTWVMLGVGLTIIYGLPRLRVPGLSAIPSPLWCILLLTVASTALHLPLKTVADLGKLPNALPFLQWPAVPLTLETLRIIV
LPALAIAMVGLLESMMTARVVDELTDTPSNKNRECTGLGIANAAASLFGGIAGCGMIGQTVGNVKYGGRGRLSTLFAGVF
LLILMVLLKPWVSQVPVVALVAIMVMVSAETFDWRSLRTVVTHPRTSSVVMLATVAVTLFTDNLAAGVAVGVLLSGVFFT
FKVAGLLQITHADSAEGVRTYSVCGQVFFASADVFIDAFDAREVPGRAVVIDVGRAYFWDITAVAALDKVVQRLRHHGLD
VQVKGLNVGSRRLMQRHALGEDALESALP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 2e-91 54
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 3e-91 54
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 3e-92 53
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-92 53
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-92 53
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-92 53
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 2e-92 53
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-92 53
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 2e-92 53
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-92 53
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 2e-92 53
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-92 53
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 3e-92 53
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 3e-92 53
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 3e-92 53
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 6e-87 53
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 6e-87 53
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 8e-87 53
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 8e-87 53