Gene Information

Name : hemC (XOO4007)
Accession : YP_202646.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4279160 - 4280074 bp
Length : 915 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGACCACGCTCCGCATCGCTACCCGCAAAAGCCCGCTCGCCCTCTGGCAGAGCGAACACGTCGCCGCCGCGTTGCGTCA
GCACCACCCTGGACTGGAGGTGGTGCTGGTGCCGATGAGCACCCGTGGCGACGAAGTGCTGGACCGCTCGCTCGCGGCGA
TCGGTGACAAGGGCCTGTTCTTGAAGGAACTGGAACTGGCGATGTTGCGCGGCGACGCCGATTGCGCCGTGCATTCGTTC
AAGGATGTGCCGATGGAACTGGACGACCCGTTCGTGCTGCCTGCGATCCTGGAACGCGGCGACCCGGCCGATGCGCTGGT
GTCCAACCTCTACGCCAGCCTGCAGGCGCTGCCGCTGGGCGCACGCGTGGGCACGTCTTCGCTGCGTCGCCAGGCGCAGT
TGCGCGCTGCGCGCCCGGACCTGGAATTGATCGACCTGCGCGGCAACGTCAACACGCGTCTGGCCAAGCTCGACAACGGC
GGCTACGACGCCATCGTGCTGGCCTGCGCCGGCCTGCAGCGGCTCGGGTTGGATGAACGCATCAGCGCGCGGCTGGATGC
ACCGGAGTGGTTGCCGGCGCCTGCACAAGGCGCGGTGGCGGTGGAATGCCGTGGCGACGACGCGCGCATCCACAGTCTGC
TGGCAGTGCTGGATGCCGGCCGCACGCGTGCCTGCGTGGAAGCCGAGCGGGCAATGAATCGCGCGCTGCACGGCAGCTGC
CATGTGCCGGTGGCCGCCCTTGCGCGCTGGGAAGGCGAGGGTCTGTTTCTGCAGGGCATGGTCGGCAGCGCCAGCGACGG
CCGCTTGATCCACGCCGACGCCCATGGCAGTGCCGACGACACTCAAGACCTGGGCCGCCGCGTTGCGCAAGGCCTGTTCG
ACAAGGGTGCCGCGCAGTTGCTGGCTGCGCTGTAA

Protein sequence : 
MTTLRIATRKSPLALWQSEHVAAALRQHHPGLEVVLVPMSTRGDEVLDRSLAAIGDKGLFLKELELAMLRGDADCAVHSF
KDVPMELDDPFVLPAILERGDPADALVSNLYASLQALPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNG
GYDAIVLACAGLQRLGLDERISARLDAPEWLPAPAQGAVAVECRGDDARIHSLLAVLDAGRTRACVEAERAMNRALHGSC
HVPVAALARWEGEGLFLQGMVGSASDGRLIHADAHGSADDTQDLGRRVAQGLFDKGAAQLLAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-64 54
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-64 54