Gene Information

Name : hslU (XOO3992)
Accession : YP_202631.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 4262222 - 4263589 bp
Length : 1368 bp
Strand : -
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGCCAAATCCCGATACATCCACCATGACTCCGCGCGAAATCGTGCAGGAGCTCGACCGTCATATCGTTGGCCAGCACGA
CGCCAAGCGCGCGGTTGCCATCGCGCTGCGTAATCGCTGGCGTCGCATGCAGTTGCCGGAAGAACTGCGCAACGAAGTGA
TGCCCAAGAACATCCTGATGATCGGTCCCACCGGCGTGGGCAAGACCGAGATCGCGCGGCGTCTGGCCACGCTGGCCAAT
GCGCCCTTCGTCAAGGTGGAAGCCACGCGCTTTACCGAAGTGGGGTATGTGGGCAAGGACGTGGAGCAGATCATTCGTGA
CCTGGCCGACACCTCGGTCAAGCTGTACCGCGAGCAGGCCAAGGTGCGCGTGCGCAATCAGGCCGAAGAGCGTGCCGAAG
ATTGCATTCTGGATGCGCTGTTGCCGCGTCGTGCAACCGGAATTGGGTTCGACCCGGAAGCGGCGCGCAACGAGCCGTCG
TCGCAGGAAAACGACACCCGCATCAAGTTCCGCCGCATGCTGCGCAACGGCGAGCTGGACGAGCGCGAGATCGAACTGGA
AGTCGCCGTTAACGCCAGCATGGACATCATGACCCCGCCGGGCATGGAGGAAATGGGCCAACAATTGCGCCAGATGTTTT
CCAATCTGGGTAGCGGCAAGTCGCAGAAGCGCAAGCTCACCATCAAGGCGGCGCGCCCGCTGTTGATCGAAGAAGAGGCC
GGCAAGCTGGTCAACGAAGACGACGTGCGCACCGCAGCGATCAAAGCCTGCGAGCAGCACGGCATCGTATTTATCGATGA
GATCGATAAGGTGGCCAAGCGCGGCGAAGCCGGCTCCAATGGCGGCGATGTCAGTCGCGAAGGTGTGCAGCGCGATTTGT
TGCCGCTGGTGGAAGGCTCCAACGTGTCGACCAAGTACGGCACGGTCAAGACCGACCACATTCTGTTCATTGCATCAGGC
GCGTTTCACCTGGCCAAGCCCAGTGATCTGATTCCGGAATTGCAGGGCCGCTTCCCGATCCGCGTGGAATTGACAGCGCT
GACCAAGGCCGATTTCGTGCGCATTCTCACTGAGCCCAAAGCCGCGTTGATCAAGCAATACGAAGCCTTGTTGCAGACCG
AAGGCGTGTCGTTGACGTTCGCGCAAGATGCAGTGGATCGGCTGGCCGAGATTGCGGCTCAGGTCAACGAGCGCCAGGAA
AATATCGGCGCGCGTCGCCTGCACACTGTGCTGGAACGTTTGCTCGATGTGTTGAGCTACGAAGCGCCGGACCGCGATGG
ACAGAGCGTCACTGTCGATGCCGCGTATGTGGACGCGCAGCTGGGTGAGCTGGTGCAGGATCCGGATCTGAGCCGCTATA
TCCTCTGA

Protein sequence :
MPNPDTSTMTPREIVQELDRHIVGQHDAKRAVAIALRNRWRRMQLPEELRNEVMPKNILMIGPTGVGKTEIARRLATLAN
APFVKVEATRFTEVGYVGKDVEQIIRDLADTSVKLYREQAKVRVRNQAEERAEDCILDALLPRRATGIGFDPEAARNEPS
SQENDTRIKFRRMLRNGELDEREIELEVAVNASMDIMTPPGMEEMGQQLRQMFSNLGSGKSQKRKLTIKAARPLLIEEEA
GKLVNEDDVRTAAIKACEQHGIVFIDEIDKVAKRGEAGSNGGDVSREGVQRDLLPLVEGSNVSTKYGTVKTDHILFIASG
AFHLAKPSDLIPELQGRFPIRVELTALTKADFVRILTEPKAALIKQYEALLQTEGVSLTFAQDAVDRLAEIAAQVNERQE
NIGARRLHTVLERLLDVLSYEAPDRDGQSVTVDAAYVDAQLGELVQDPDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 3e-101 48