Gene Information

Name : nagA (XOO3915)
Accession : YP_202554.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 4177415 - 4178575 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence : 
TTGAACATGGATGCTTCCCGCACTCAGGCATTGTGCAATGCGCGTGTACTCACCGATGACGGCCTGCAGGACGGCCTGGT
CGTGGTGCTGGCTGGCACGCAGATCCAGGCGATTGTGCCGGCCGATGATGCACGCGTTGCGCAGGCCGCCACGCGCGTGG
ATCTGGGTGGCGCCACCTTGTTGCCAGGCTTTATCGACATCCAGGTCAACGGCGGCGGTGGCGTATTGTTCAACAACGCA
CGCGACCCGCAGGCGCTGGCGACCATCGCCGCCGCGCATCGTCGTTTCGGCACCACCGGCATGCTGCCGACCTTGATCAG
CGATACCGCGCAGGTGATGGCCGAAGCGATCGAGGCCACCCGCGCAGCCATCGCGCAAGGCGTGCCCGGCGTGCTCGGCA
TCCATCTGGAAGGCCCGTACCTGAGCCCTGCACGCAAGGGCACGCATGACGAACACAAGTTCCGGCTGCCGGACGCGCAC
GAAATTGCCGTCGACACATCGCTGGACAACGGCGTCACCTTGATCACGCTCGCACCCGAGCGCGTGCCGCTGGACGATAT
CCGTGCCTTCGTTGCCGGCGGCGCGATCGTGTTCGCTGGCCACACCGCGGCGACTTACGAGCAGGCACGCGACGGCATCG
CTGCCGGGGTGAGCGGCTTCACGCACGTGTACAACGCGATGTCGCAACTGGCTGGCCGCGAACCCAATGCAGTCGGCGCA
GCGCTGGAAGACCCCAACGTGTGGTGCGGCGTCATCGTCGATGGCGTGCATGTGCACCCGGCCAGCCTGCGCGTGGCGCT
CGCGGCCAAGCCACGCGGCAAGCTGTTGCTGGTCACCGACGCCATGCCCATGGTCGGCAGCGACAGCCCCGGCTTCGACC
TGTACGGCGAAACCATCACCGCCTTGGATGGCGTGGTGCGCAATGCCGACGGCGCACTGGCCGGTTCGGCATTGGACATG
GCCACCGCCGTGCGCAACAGCGTGCGCTGGCTCGGTGTGGACCTGGCCGAAGCCGCGCGCATGGCCTCGACGTATCCGGC
GCAATGTATCGGCCTTGGCGAACGTCTCGGCCGCATTGCGCCAGGCTACCAGGCCGACCTAGTGCTGGTGGATGCCGACG
TGCAGGTGCTGGGCACCTGGATCGCTGGGCAGCGCGACTAA

Protein sequence : 
MNMDASRTQALCNARVLTDDGLQDGLVVVLAGTQIQAIVPADDARVAQAATRVDLGGATLLPGFIDIQVNGGGGVLFNNA
RDPQALATIAAAHRRFGTTGMLPTLISDTAQVMAEAIEATRAAIAQGVPGVLGIHLEGPYLSPARKGTHDEHKFRLPDAH
EIAVDTSLDNGVTLITLAPERVPLDDIRAFVAGGAIVFAGHTAATYEQARDGIAAGVSGFTHVYNAMSQLAGREPNAVGA
ALEDPNVWCGVIVDGVHVHPASLRVALAAKPRGKLLLVTDAMPMVGSDSPGFDLYGETITALDGVVRNADGALAGSALDM
ATAVRNSVRWLGVDLAEAARMASTYPAQCIGLGERLGRIAPGYQADLVLVDADVQVLGTWIAGQRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-55 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA YP_202554.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 8e-56 41