Gene Information

Name : YXOOp13 (YXOOp13)
Accession : YP_001001495.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4149696 - 4149965 bp
Length : 270 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/FrameD

DNA sequence :
TTGGACGTGAAGAAGCGTTTTTCCGAAGAGCAGATCATCGGCTTCCTGCGCGAAGCCGAGGCCGGCATGCCGATCAAAGA
CCTGTGCCGACGGCATGGCTTCAGTGAGGCGTCCTACTACCTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATG
CCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTG
ATCAAGGATGCGCTGCAAAAACAATGGTGA

Protein sequence :
MDVKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDL
IKDALQKQW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 9e-25 69
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-25 69
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-25 69
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-25 69
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 3e-17 49