|
Name : XOO3888 (XOO3888) Accession : YP_202527.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Unknown Product : IS1404 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4148856 - 4149401 bp Length : 546 bp Strand : - Note : - DNA sequence : GTGCCGCTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCG CACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGC GTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGTGGCCTGCCGAAGATGATCCGCACG GACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCACGCCAATGGTGTGCAGCTACGCCAGATCCAGCC TGGCAAGCCGAACCAGAATGCCTATGTCGAATCCTTCAACGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCC CAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGC GGAATGACGCCGGTGGCCTATGCCCAGCAGTTGGCCAATAGCGAGATCATCACCCCCGGACTCTAA Protein sequence : MPLGERAPLLRPTKANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRT DNGKEFCGKAMVAWAHANGVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIG GMTPVAYAQQLANSEIITPGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 2e-44 | 59 |
| unnamed | CAB46578.1 | IS1222-like transposase | Not tested | HPI | Protein | 8e-35 | 55 |
| RS13 | AAP82958.1 | putative transposase | Not tested | PAPI-2 | Protein | 9e-33 | 53 |
