Gene Information

Name : ribE (XOO3854)
Accession : YP_202493.6
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 4114398 - 4115000 bp
Length : 603 bp
Strand : -
Note : catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine

DNA sequence :
ATGTTTACTGGAATCATCGAAGGCGTCGGCCAGCTAGCGGCGCGTCAGCCGCAGGGCGGCGATGTACGTTTCACCTTCGC
CACCGGCACGCTGCCGTTCGAGTCTGTCCAGTTGGGCGAGAGCATTGCGGTCAATGGCGTGTGTCTGACCGTGGTTGCGT
TTGATGCAGCCAGTTTTCAGGCCGATGCCTCCACCGAAACCCTGTCGCTGACCACGCTGGGCGCACTGCCGGAAGGCGCG
CTGCTCAATCTGGAACGCGCGATGCGCCCGATCGACCGCCTGGGCGGGCACCTGGTCAGCGGACATGTGGATGGCCTGGG
CCAGGTGCAGTCTGTCCATGACGATGCACGCGCGCAGCGCTGGCGGTTTGCCGCGCCGCCGGCGGTGTTGCGCTATGTGG
CCAAGAAGGGCTCGATCTGCGTAGACGGCGTCAGCCTCACCGTCAATGAAGTGGACGAAGAAGGCTTCGAAGCGGCGTTG
ATTCCGCATACGATGGCCAACACCGCGTTTGCGCAGACGGCAGTGGGTGCGACGGTGAATCTGGAAATCGATCTGGTGGC
GCGCTATGTCGAACGCCTGCTCGGCACGCGGGGTACGGCATGA

Protein sequence :
MFTGIIEGVGQLAARQPQGGDVRFTFATGTLPFESVQLGESIAVNGVCLTVVAFDAASFQADASTETLSLTTLGALPEGA
LLNLERAMRPIDRLGGHLVSGHVDGLGQVQSVHDDARAQRWRFAAPPAVLRYVAKKGSICVDGVSLTVNEVDEEGFEAAL
IPHTMANTAFAQTAVGATVNLEIDLVARYVERLLGTRGTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 4e-33 48
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 4e-33 48