Gene Information

Name : XOO3552 (XOO3552)
Accession : YP_202191.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3824259 - 3825185 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence : 
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAACAATGGTGAGCGCACCGGCGC
GTCGTGCGCTGGTGCGCGAGTGGATCGAAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATCGCCCGCGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCTTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATT
GCGAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGCTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCCGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGT
GGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATC
GGTTGGCACACAGTCGTGGCCTGCCGAAGGTGATCCGCACCGACAATGGTAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATGGTGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAA
CGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACGAACACCGCCCCAAAAAACAATCGGCGGAATGA

Protein sequence : 
MAQQVRRHERARCQAAQGPGGREHATEEVAGRAGVPERPDQGCAAKTMVSAPARRALVREWIEGGASERCALAAIGMSAS
ALRYRPREDRNVELRERILALAHRHRRYGLGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPLGERAPLLRPT
KANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVA
WAHANGVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKQSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 9e-55 52
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-35 43
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 5e-36 41