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Name : hsdM-1 (XOO3457) Accession : YP_202096.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Unknown Product : type I restriction system adenine methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 3695506 - 3697443 bp Length : 1938 bp Strand : - Note : - DNA sequence : GTGGACGCTGGATCATGTGGTGCGCGCGCTGATCGAGCACTATGCGGCTACCGACGCCGAAACAAAACGCATTGTGCCGC TGAAACGGCTTTACTGGCCCGCCTGAAGCCAGAGGAAGAAAAAGTGACATCTACCGAACAAAAGATCGAGCGCTTCATCG CCGCCTTGGCTTCGCTTGGCGGCAGCGCGGGCAATCAACGCCTGCGTGAGGAACTGGGCTGGCAGGACAGCACCTACCAA CGCATCAAGCAGCAACTGATCGACGACGGCCGCATCCGCGCTGGTCGGGGGCGAGGCGGATCGGTTTCCTTGACGGCGTC CACCCAAACGCCGGCTACGCCCAATATTGCAGCCGAGCCCAAGCCGACACGGGCCAAACCCGCGCCTGCACCGCTCAAGA AGGAATCTGTGTCCGAACTCGACTACGCTGACAAGCTCTGGAAAACCGCCGACAAGCTGCGCGGCAACATGGAGCCCAGC GACTATAAGCACGTTGTGCTCGGCCTGATTTTTCTCAAATATATCTCGGATGCCTTTGAAGCCCGGCACGCAGCATTGCT GGCCGAAGATCCACCAGCGGCAGAGGACAAGGACGAGTACCTCGCCGAGAATATTTTCTGGGTTCCCAAGCAGGCACGTT GGTCGCACCTGCAGGCAAACGCAAAGCAATCCAGCATCGGCACGCTGATCGACGACGCCTTGCGCGCCATCGAGAAAGAC AACGAATCGCTGAAAGGCGTGCTGCCCAAGGACTACGCGCGCCCCGCGCTCAACAAGGTGATGCTGGGCGAGCTGATCGA CCTGATTTCTGGTATTGCACTCAACGATAAGGGCGGCAAGCCCAAGGACGTGTTGGGCCGCGTGTACGAATATTTTCTCG GCCAGTTTGCCGGCGCCGAAGGCAAGCGCGGCGGCGAGTTCTACACACCGCGCAGCGTGGTGCACACCCTGGTGGAGATG ATTGAGCCATACAAAGGCCGCATCTACGACCCCTGCTGCGGTAGCGGCGGCATGTTCGTGCAGAGCGAGAAGTTCGTCAA CGAGCACGGCGGGCGCATCGGCGACATCGCCATCTATGGGCAGGAAAGCAATTACACGACCTGGCGCCTGTGCAAGATGA ACCTTGCCGTGCGCGGTATCGACAGCGACATCCGCTGGAACAACGAGGGCAGCTTTCACAAGGACGAACTACGCGACCTG AAGGCCGACTTCATCCTGGCCAACCCGCCGTTCAATATCTCCGACTGGGGCGGCGAGCGCCTGCGCGACGACGTGCGCTG GGCGTTCGGGCCACCACCGGTGGGCAATGCCAACTACGCCTGGTTGCAGCACATCGTCCATCACCTCAGCCCGCACGGCT TCGCCGGCGTTGTCCTGGCGAATGGCTCAATGAGCAGTCAGCAAAGTGGTGAAGGCGACATCCGTAAATCGATGATCGAA GCCGGTGTGGTCGACTGCATGGTCGCCCTGCCAGGGCAATTGTTTTATTCCACGCAGATTCCGGCCTGCCTGTGGATTCT GGCCAAGGACCGCAGCAACGGACTGGTGCTGCAGAGCAAGCTGCGCGACCGCCGTGGCGAAATCCTGTTCATCGACGCCC GCAACATGGGCACATTGGTTGACCGCACCCGGCGCGAATTGAGCGATGCCGAGGTGGCCAGGATCGCGGCGACCTATCAC GCATGGCGTGGCGAACAGGATGCAGGCGACTACGCGGATATCGCCGGGTTCTGCAAGTCCGCCCCGCTCGATGAGGTGCG CAAGCACGGCCACGTACTCACGCCGGGCCGCTATGTTGGCGCAGCGGCGCAGGAGGATGACGGCGAACCGTTTGCACAGA AGATGCAGCGCCTGGCAACGCTATGGCGGGAGCAGCAGCAGGAAGCGGCGAAGCTTGACGCAGCGATCGAGATGAATCTG AAGCACCTGGGGTTCTGA Protein sequence : MDAGSCGARADRALCGYRRRNKTHCAAETALLARLKPEEEKVTSTEQKIERFIAALASLGGSAGNQRLREELGWQDSTYQ RIKQQLIDDGRIRAGRGRGGSVSLTASTQTPATPNIAAEPKPTRAKPAPAPLKKESVSELDYADKLWKTADKLRGNMEPS DYKHVVLGLIFLKYISDAFEARHAALLAEDPPAAEDKDEYLAENIFWVPKQARWSHLQANAKQSSIGTLIDDALRAIEKD NESLKGVLPKDYARPALNKVMLGELIDLISGIALNDKGGKPKDVLGRVYEYFLGQFAGAEGKRGGEFYTPRSVVHTLVEM IEPYKGRIYDPCCGSGGMFVQSEKFVNEHGGRIGDIAIYGQESNYTTWRLCKMNLAVRGIDSDIRWNNEGSFHKDELRDL KADFILANPPFNISDWGGERLRDDVRWAFGPPPVGNANYAWLQHIVHHLSPHGFAGVVLANGSMSSQQSGEGDIRKSMIE AGVVDCMVALPGQLFYSTQIPACLWILAKDRSNGLVLQSKLRDRRGEILFIDARNMGTLVDRTRRELSDAEVARIAATYH AWRGEQDAGDYADIAGFCKSAPLDEVRKHGHVLTPGRYVGAAAQEDDGEPFAQKMQRLATLWREQQQEAAKLDAAIEMNL KHLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 3e-153 | 59 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 9e-153 | 59 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 2e-153 | 58 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 1e-121 | 48 |
