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Name : XOO3452 (XOO3452) Accession : YP_202091.6 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Unknown Product : type I restriction-modification system endonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 3688896 - 3691550 bp Length : 2655 bp Strand : - Note : - DNA sequence : TTGCAGACCTACAAACAGCAGATCCCCGCGTTGTTCCATACCAATGCGTTGTTGGTCACTTCCGATGGCATTGCCGCGCG GGTCGGCTCGCTGTCCGCCGATCTGGAGCGCTTCATGCCGTGGCGCACCACCGACGGCAAGCAGGTGCTGCCCAAGGGGC AGCCGGAGCTGCCTACGCTGATTGAGGGGGTATTCGCGCCACAACGGTTTCTGGAGCTGCTGCGCTGGTTCACCGCCTTC GGCGAAACCGGTGGCGGGCTGGTCAAGATCATTGCCGGTTACCACCAGTTCCATGCGGTCAACCACGCGGTGGAATCGAC AATTCGCGCTTCACGCAGCGCCGTTGCCGAAGATCCAGCCAAGTACGGCTCGGCCAGCGTTAAAGCGCAGCCGGCAGGCG ACCGCAGGGCGGGGGTGATCTGGCATACGCAGGGTAGTGGCAAGAGCCTGCTGATGGCCTTCTACGCCGGGCGGCTGGTG CAGCACCCGGCGATGCGCAACCCGACGCTGGTGGTGCTGACCGACCGCAACGACCTGGACGACCAGTTGTTCGGCACGTT TTCGATGTGCAAGGCGCTGCTCCGGCAGACACCGGTGCAGGCCGATAGCCGCGAGGATCTGGCGCGCCTGCTGGATCGCG CAAGCGGCGGTGTGATCTTTACCACCTTGCAGAAGTTCGGTGAAGTGGATGCGCCATTGACCGCGCGCCGCAACGTGGTG GTCATTGCCGATGAAGCGCACCGCAGCCAGTACGGCCTGAAAGCCAAACTGGACGCGAAGACCGGCATGGTCTCGTATGG CTTTGCCAAATACATGCGCGATGCGTTGCCCAATGCCTCGTTCATCGGCTTCACCGGCACGCCCATCGAAGCCACCGACG TAAATACCCCGGCGCTGTTCGGCCATTACATCGATGTCTACGACATCAGCCGCGCGGTGGAAGATGGTGCAACTGTCCCG ATCTATTACGAATCGCGGCTGGCGCGCATTGAACTGGATGAAGACGAAAAGCCTCATTTGGATGCAGAGGTCGAGGCCCT GTTCGAGTGGGAAGGCACAGATGAAAAGGAAAAGCTGAAAGGGCGGGCAGCGGCGGTGGAGCGGCTGGTCGGCAGCCAGA AGCGGCTGGCCCTGGTGGCGCAGGACCTGGTAACGCACTTCGAAGAGCGTGTGGCTGCGCTGGATGGCAAGGCGATGGCG GTGTGCATGAGCCGCGAGATCTGCGTTGACCTTTATAACGAAATCGTCAAGCTGCGCCCGCACTGGCACAGCGATGACGA CACGCTGGGCGCGGTCAAGATCGTGATGACCGGCGCGGCCAGCGACCCGACGCAATGGCAGCAACATATCGGTAACAAGG CCCGGCGAGATGCGTTGGCGCGCCGTGCCAAGGATCCGGCCGACCCGTTGAAGCTGGTGATCGTGCGCGACATGTGGCTG ACCGGCTTCGATGCGCCTTCCATGCACACCATGTACGTGGACAAGCCGATGAAGGGGCATGGCCTGATGCAGGCCATCGC GCGGGTCAACCGCGTATTTCGGGACAAGCCGGCCGGCTTGATCGTCGACTACATCGGTATCGCCCAGAACTTGAAATCCG CCCTGGCGCAGTATTCGCCCCAGGACAAACAGAACACCGGCATCGACGAAGCGCAGGCGATCGCCGTGATGCGGGAGAAG TACGAAGTCGTGCGGGACATGTACCACGGCTTTGATTACCTCACCGCACTGAATGGCACACCGCAGCAGCGTCTGACGAT GATGGCCGGTGCGATCGAGTGGATCCTCGATCAGCAGCAGCAATGGGTAGCCGCGGCAAGCAGCGACGATGGCAAGAAGG CAGCGCAACGGCGTTACCAGGATGCGGTGCTGGCCTTATCCACGGCCTATGCGCTGGCCTCCGCCTCGGATGAGGCGCTT GCAGTGCGTGAGGAGGTGGGCTTCTTCCAGGCGATCCGCGAAGCCTTGGTCAAAAGCGCGACGGGTTCAGGCATCAACTC GCAGGAGCGCGATTTTGCCATCCGCCAGATCGTGAGCCGTGCGGTGGTCTCCACCGAGATCGTGGATATCCTCAAGGCTG CTGGCATCCAGTCGCCGGACATTTCCATCCTGTCCGACGAATTCCTTGCCGAAGTGCAGCGGATGGACAAGAAGAACCTG GCATTGGAAGCGCTGCGCAAGCTCATCAACGATGGCATCCGTTCGCGTAGCAAGCGCAACATTGTAGAGACCAAGGCATT TTCGGAACGGCTGGAAGACGCGATTGCGCGCTACCACGCCAATGCCATCACCACTGCCGAAGTCTTGCAGGAACTGATTT GCATCGCCAAGGACATCCGCGCGGCACGTGCGCGTGGCGAAGAGCAGGGGCTGAGCGAGGATGAAGTCGCCTTCTACGAT GCGTTGGCAGAGAATGATTCTGCAGTGCAACTGATGGGAGACGATGCACTCAAGGTCATCGCACACGAGCTGCTGGTGAG CCTAAAGGGCAGCGCCTCGGTGGATTGGGCGCGGCGCGACTCGGCGCGTGCGCGCATGCGTGTGCTGGTGAAGCGCATCC TGCGCAAATACGGCTATCCGCCCGATTTGCAGGATGCTGCAGTGCGAACGGTGCTGCAGCAGGCAGAGGCACTCTCTGCT GGCTGGTCTGCATGA Protein sequence : MQTYKQQIPALFHTNALLVTSDGIAARVGSLSADLERFMPWRTTDGKQVLPKGQPELPTLIEGVFAPQRFLELLRWFTAF GETGGGLVKIIAGYHQFHAVNHAVESTIRASRSAVAEDPAKYGSASVKAQPAGDRRAGVIWHTQGSGKSLLMAFYAGRLV QHPAMRNPTLVVLTDRNDLDDQLFGTFSMCKALLRQTPVQADSREDLARLLDRASGGVIFTTLQKFGEVDAPLTARRNVV VIADEAHRSQYGLKAKLDAKTGMVSYGFAKYMRDALPNASFIGFTGTPIEATDVNTPALFGHYIDVYDISRAVEDGATVP IYYESRLARIELDEDEKPHLDAEVEALFEWEGTDEKEKLKGRAAAVERLVGSQKRLALVAQDLVTHFEERVAALDGKAMA VCMSREICVDLYNEIVKLRPHWHSDDDTLGAVKIVMTGAASDPTQWQQHIGNKARRDALARRAKDPADPLKLVIVRDMWL TGFDAPSMHTMYVDKPMKGHGLMQAIARVNRVFRDKPAGLIVDYIGIAQNLKSALAQYSPQDKQNTGIDEAQAIAVMREK YEVVRDMYHGFDYLTALNGTPQQRLTMMAGAIEWILDQQQQWVAAASSDDGKKAAQRRYQDAVLALSTAYALASASDEAL AVREEVGFFQAIREALVKSATGSGINSQERDFAIRQIVSRAVVSTEIVDILKAAGIQSPDISILSDEFLAEVQRMDKKNL ALEALRKLINDGIRSRSKRNIVETKAFSERLEDAIARYHANAITTAEVLQELICIAKDIRAARARGEEQGLSEDEVAFYD ALAENDSAVQLMGDDALKVIAHELLVSLKGSASVDWARRDSARARMRVLVKRILRKYGYPPDLQDAAVRTVLQQAEALSA GWSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 50 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
