|
Name : tnp (XOO3089) Accession : YP_201728.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 3319937 - 3321040 bp Length : 1104 bp Strand : + Note : - DNA sequence : ATGCCTGGGCGTATCAGCTTCGCTTCTCAGGATACGAGTTGCATCTCAAGGATTAGGGAAACTCTGAACACCTCCCCCCT GATCCTGCGACAATCGCACAGACGCAACGTGACGACGACGATGCAACTGACCTTCGGAGACGCGGAGTACAACGGCAAGC GCAAGCGGACGCGGCGTGAGGTGTTTTTGGCCGAGATGGATCAGGTCGTGCCATGGAAGGGCCTGCTGGCGCTGATCGAG CCGCACTATCCAAAGTCGGGGCAGCCGGGGCGACAGCCGTATCGGCTGGAGACGATGCTGCGCATCCACTTTTTGCAGCA GTGGTATGCGCTGAGCGATCCCTCGGCGGAAGAAGCGCTGTACGACACGGTGTCGATGCGCCGCTTCGCGAAGATCGGCG GGCTGGACGAGGTGCCGGATGAAACGACGATTCTCCACTTCCGGCATCTGCTGGAGCGGCATGATCTGGCGCGCAAGCTG TTCAACCGGGTCAACGCGCACCTGTCGCGTAAAGGGCAGAGTCTGCGGGGCGGGACGATCGTGGATACCACGATCATTGC GGCGCCCAGTTCGACCAAGAACAAGCAGGGCGAGCGCGATCCGGACATGCACCAGACCAAGAAGGGGAATCAATATGACT TCGGGATGAAGGCGCACATCGGGGTGGACGATGACTCCGGGCTGGTGCACCACGTCGAATGCACGGCGGCCAACGTGGCC GATATCACGCAAGCGCACAAGCTGCTGCACGGCAAGGAAGACACGGTGTGCGGGGACAGCGGCTACACCGGGCTTGAGAA GCGCGAGGAAATGAAGCGCAAGCGCACGCTGCGCTACCTGATCGCCGAGAAACCCTCGAAGCTGAAGCAGATCAAGAACA AACGCGAACTGAAGTTGGCCAAGCGCTGGGAGCACACCAAGGCCAGCCTGCGGGCGAAGGTGGAACACCCGTTCCGGGTG ATCAAGCGTCAGTTTGGTTACGTCAAGGTGCGCTATCGCGGCCTGGTCAAGAACACCGCGCAGATGCTAACGCTGTTTGC GTTGTCGAATCTGTGGCTGAAGCGCAAAGAGTTAATGCCCGCTGCGGGGAAGGTGTGCCTGTAA Protein sequence : MPGRISFASQDTSCISRIRETLNTSPLILRQSHRRNVTTTMQLTFGDAEYNGKRKRTRREVFLAEMDQVVPWKGLLALIE PHYPKSGQPGRQPYRLETMLRIHFLQQWYALSDPSAEEALYDTVSMRRFAKIGGLDEVPDETTILHFRHLLERHDLARKL FNRVNAHLSRKGQSLRGGTIVDTTIIAAPSSTKNKQGERDPDMHQTKKGNQYDFGMKAHIGVDDDSGLVHHVECTAANVA DITQAHKLLHGKEDTVCGDSGYTGLEKREEMKRKRTLRYLIAEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRV IKRQFGYVKVRYRGLVKNTAQMLTLFALSNLWLKRKELMPAAGKVCL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 4e-98 | 63 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 4e-71 | 59 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 3e-71 | 59 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 2e-58 | 55 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-57 | 46 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 1e-57 | 46 |
