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Name : vipA (XOO3082) Accession : YP_201721.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Virulence Product : polysaccharide biosynthetic protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3313630 - 3314922 bp Length : 1293 bp Strand : - Note : - DNA sequence : ATGTCCGGCCACACGCATCTCTCACCGCCACCAGGGCGCATCGCCGTCATCGGCTTAGGCTATGTCGGCCTGCCGCTGGC GGTTGCATTCGGTGAGCAGCGCGACACCCTGGGCTTCGACATCGATGCGCAGCGTGTTGCGCAATTGCGCGATGGCCACG ATGCCACGCTGGAACTGGACGAGACCGAGTTGGCTGCGGCAACGCAGGTGCGCTACGCCGCAGACGCGGCGGACCTGGCC TCGTGCAGCATCTTCATCGTGACCGTGCCGACGCCGATCGACAGCTTCGAGCAACCGGATCTGGAGCCGCTGCGCAGTGC CACTGCGTTGATTGCTGCTGCACTCAAGCCTGGCGATCTGGTGATCTACGAATCCACGGTCTATCCCGGCACCACCGAAG AAGTTTGCGTGCCCTTGCTAGAAGCAGCCTCCGGGCTGCGCTTCAACCACGATTTCTTCTGTGGCTACAGCCCCGAGCGC GTCAATCCGGGCGATCGCCAGCGGCGTCTGCGCGACATCCGCAAGATCACTTCCGGCTCGACGCCTGAGGCCGCTGATGC GGTCGATGCGCTGTACACCAGCATCATTACCGCTGGCACCTGGCGCGCCCCGTCGATGCGCGTGGCCGAAGCGGCAAAGG TGGTCGAGAACATTCAGCGCGACGTCAATATCGCGCTGGTGAACGAACTGGCGTTGATCTTCGACAAGCTGGGAATCGAC ACGCTCGATGTGCTCGAAGCCGCGGGAACCAAGTGGAATTTCCTGCCGTTTCGTCCTGGCCTGGTTGGCGGGCATTGCAT CGGGGTGGATCCGTATTACCTGATGCACAAATCCCAAAGCGTGGGCTATCACCCCGACCTGATCCACACCGCGCGGCAGG TCAACAATCGCGTCGGCCGCCATGTGGCCGAGCGCGTCTGCGGCATGCTGGCCATGCAGGGCATCGCGCTCGCGCAGGCG AGGGTGCTGGTACTGGGCGCTACCTTCAAGGAGAACTGCCCGGATCTGCGCAACAGCCGCGCCCTGGAATTGGTGCACTT GCTGCAGGCCGCGGGGGTGCAGGTGGACACCTGCGACCCGTGGGCAGACCCGGTGGAGGCGCTGCAGCACAGCGGCGTGC AGCTCTGCGAGATGCCCCAGGACGGCGCCTACGACGCCGTGGTGCTGGCGGTGGCGCATGCGCAGTATCGCGCCTACGAC GCCGCGCGCATTGCCGCGCTCGGCAAACCGGGCGCGGTGGTCTACGACGTCAAATCGGCGTGGCCGCGTGTGGCTGTCAG CGATCGTCTGTAG Protein sequence : MSGHTHLSPPPGRIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDETELAAATQVRYAADAADLA SCSIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTTEEVCVPLLEAASGLRFNHDFFCGYSPER VNPGDRQRRLRDIRKITSGSTPEAADAVDALYTSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGID TLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLMHKSQSVGYHPDLIHTARQVNNRVGRHVAERVCGMLAMQGIALAQA RVLVLGATFKENCPDLRNSRALELVHLLQAAGVQVDTCDPWADPVEALQHSGVQLCEMPQDGAYDAVVLAVAHAQYRAYD AARIAALGKPGAVVYDVKSAWPRVAVSDRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-109 | 51 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-109 | 51 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-95 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| vipA | YP_201721.1 | polysaccharide biosynthetic protein | VFG0431 | Protein | 1e-109 | 51 |
