Gene Information

Name : XOO3052 (XOO3052)
Accession : YP_201691.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3285642 - 3286337 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
GTGCGCTGTTGTTGTCATTGGATCCTGCGGGCAAGCCCATCACGCATATCCATACCTGCCATGCCGGTGTTCGATTTCAT
TCCGCCGGCAGCAGCGCACACGATGCATCTCCGGTGCAAGGGGGACGCCTTTGCCACATGGCCGCTGCAACCGCAGCGTC
CAGCAACCACGCAGATCATCGGAGGCCGCATGTCCGTTCGCAGCAGCAGTCAGAAGTTCATTGCCAGAAATCGCGCGCCT
CGCGTGCAGATCGAGTACGACGTCGAGATTTACGGCTCGCAGAAAAAGGTGCAGGTTCCGTTCGTCATGGGTGTGTTGTC
GGATCTGTCCGGCGCCAATACCGAACACCTGCCGGCGCTGGAAGCACGCGAGGCAGTGGAAATGGATGTCGACAATTTCG
ACAGCCGGCTGCGTGCCATGCAACCGCGCGTGGCCATGAGCGTTTCCAATACGCTCACCGGCAGCGGCGAGTTACCGGTC
GATATCACCTTCGACAGCCTGGACGATTTTTCGCCCACCGCGGTCGTGAAAAAGGTGGCACCGCTGGCCGAGCTGCTGGA
AGCACGTACCCAGCTGGCCAATCTAGGCACTTACCTTGACGGCAAAGCCGGCGCCGAGCGCTTGATCGCCGATGCGATCA
AGGATCCCACCCTGCTGCGTTCGCTGGTCGCGGCTCCCAAGTCGAAGGATGCGTAA

Protein sequence :
MRCCCHWILRASPSRISIPAMPVFDFIPPAAAHTMHLRCKGDAFATWPLQPQRPATTQIIGGRMSVRSSSQKFIARNRAP
RVQIEYDVEIYGSQKKVQVPFVMGVLSDLSGANTEHLPALEAREAVEMDVDNFDSRLRAMQPRVAMSVSNTLTGSGELPV
DITFDSLDDFSPTAVVKKVAPLAELLEARTQLANLGTYLDGKAGAERLIADAIKDPTLLRSLVAAPKSKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 9e-52 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO3052 YP_201691.1 hypothetical protein VFG2069 Protein 4e-53 66