Gene Information

Name : tnpX1 (XOO2747)
Accession : YP_201386.6
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1113 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 2912430 - 2913632 bp
Length : 1203 bp
Strand : -
Note : -

DNA sequence :
GTGGAACTGGATAAGACGATGCTGGACGAACTGACGTCAGGCTGCAAGACGCCACAGGACGTGGAGAAGCTGTTTTCGCA
AATGTTGCAGCACATGATCAATCGCTCGTTGGAGGCGGAGATGCAAGCCCATGTGGGCCATGCGCCGCATGGGCGCTCAT
GCGGCAACGTGCGCAATGGCAAGAGCCGCAAGACGGTGCAAAGCGCGTTGGGCGAGTTGCACATCGAGACCCCGCGCGAC
CGCGCGGGCACGTTCGCGCCACAGTTGGTGAAGAAACGCCAGGTGCGGCTGGCGGGGATGGAGGAGAATATTCTGGCGTT
GTACGCGCGCGGCATGACCACGCGCGACATCGAGTCTGCGCTGGTGGACGTGTATGGGGTGGAGATATCGCATGGGTTGA
TCGCACAGGTGACCGACGCGGTGCAGGAGGAGGCGCGGGCATGGCAATCGAGGCCGCTGGAGGCGATCTATCCGATCGTG
TGGCTGGACGGCATCGTGGTGAAGGTGCAGCACAACAAGCAGGTCATCAACAAGGCCGCGCACGTGGTGCTGGGGGTCAA
CCTGCGCGGGGAGAAGGAAGTGCTTGGCCTGTGGTTGGCTGAACACGAGGGCGCCCAATACTGGCTGTCGGTGTTGACCG
AACTGCGTCATCGCGGCGTGCGCGACATCTACATCGCCTGCATGGATGGCTTGAAGGGCCTGCCCGAAGCGGTGCAAGCG
GTGTTTCCGCAGACGCTCACGCAACTGTGCATTGTGCATTTGGTGCGGGCCAGCCTGCGCTACGTCAACGCAGGCGACAG
CAAGGCGGTTGTGGCTGCGCTCAAGCGCATCTATCAGTCGGCCACGGCGGAAGAAGCGGCGGCGGAACTGGAGGCGCTGG
ACACGCAGTGGGGCGACAAATACCGTGCGGTGGTCCGCTTGTGGCGGGGCAACTGGGACAACATCATCCCGTTCTTGCAG
TTCGTGCCGCAGATCCGCAAGGTGATCTACACCACCAATGCCATCGAATCGTTGAACATGGTCATGCGCAAGCTCACCCG
CAACCGGCGTATTTTCCCCAACGACGATTCGGCGCTCAAATCGTTGTTTTTGGCCGTGCGCGAGGCATCGAAGAACTGGC
GGTCCATCCATCACTGGAAACCGGCTCTGCAAAGCTTCCAGGTGATGTTCGGCGAAGAACGCGTGCCGATGAATGCGCTA
TGA

Protein sequence :
MELDKTMLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSCGNVRNGKSRKTVQSALGELHIETPRD
RAGTFAPQLVKKRQVRLAGMEENILALYARGMTTRDIESALVDVYGVEISHGLIAQVTDAVQEEARAWQSRPLEAIYPIV
WLDGIVVKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQA
VFPQTLTQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFLQ
FVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 8e-98 50
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 5e-76 47
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 1e-77 46
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 4e-77 45
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 5e-84 43