|
Name : tnpX1 (XOO2471) Accession : YP_201110.6 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Unknown Product : IS1113 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 2624369 - 2625571 bp Length : 1203 bp Strand : + Note : - DNA sequence : GTGGAACTGGATAAGACGATGCTGGACGAACTGACGTCAGGCTGCAAGACGCCACAGGACGTGGAGAAGCTGTTTTCGCA AATGTTGCAGCACATGATCAATCGCTCGTTGGAGGCGGAGATGCAAGCCCATGTGGGCCATGCGCCGCATGGGCGCTCAG GCGGCAACGTGCGCAATGGCAAGAGCCGCAAGACGGTGCAAAGCGCGTTGGGCGAGTTGCAGATCGAGACCCCGCGCGAC CGCGCGGGCACGTTCGCGCCACAGTTGGTGAAGAAGCGCCAGGTGCGGCTGGCGGGGATGGAGGAGAAGATTCTGGCGTT GTACGCGCGCGGCATGACCACGCGCGACATCGAGTCTGCGCTGGTGGACGTGTATGGGGTGGAGATATCGCATGGGTTGA TCGCACAGGTGACCGACGCGGTGCAGGAGGAGGCGCGGGCATGGCAATCGAGGCCGCTGGAGGCGATCTATCCGATCGTG TGGCTGGACGGCATCGTGGTGAAGGTGCAGCACAACAAGCAGGTCATCAACAAGGCCGCGCACGTGGTGCTGGGGGTCAA CCTGCGCGGGGAGAAGGAAGTGCTTGGCCTGTGGTTGGCTGAACACGAGGGCGCCCAATACTGGCTGTCGGTGTTGACCG AACTGCGTCATCGCGGCGTGCGCGACATCTACATCGCCTGCATGGATGGCTTGAAGGGCCTGCCCGAAGCGGTGCAAGCG GTGTTTCCGCAGACGCTCACGCAACTGTGCATTGTGCATTTGGTGCGGGCCAGCCTGCGCTACGTCAACGCAGGCGACAG CAAGGCGGTTGTGGCTGCGCTCAAGCGCATCTATCAGTCGGCCACGGCGGAAGAAGCGGCGGCGGAACTGGAGGCGCTGG ACACGCAGTGGGGCGACAAATACCGTGCGGTGGTCCGCTTGTGGCGGGGCAACTGGGACAACATCATCCCGTTCTTGCAG TTCGTGCCGCAGATCCGCAAGGTGATCTACACCACCAATGCCATCGAATCGTTGAACATGGTCATGCGCAAGCTCACCCG CAACCGGCGTATTTTCCCCAACGACGATTCGGCGCTCAAATCGTTGTTTTTGGCCGTGCGCGAGGCATCGAAGAACTGGC GGTCCATCCATCACTGGAAACCGGCTCTGCAAAGCTTCCAGGTGATGTTCGGCGAAGAACGCGTGCCGATGAATGCGCTA TGA Protein sequence : MELDKTMLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSALGELQIETPRD RAGTFAPQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHGLIAQVTDAVQEEARAWQSRPLEAIYPIV WLDGIVVKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQA VFPQTLTQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFLQ FVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 6e-99 | 50 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 2e-77 | 47 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 6e-79 | 46 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 1e-78 | 45 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 3e-85 | 44 |
