Name : XOO2185 (XOO2185) Accession : YP_200824.1 Strain : Xanthomonas oryzae KACC10331 Genome accession: NC_006834 Putative virulence/resistance : Virulence Product : epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2295421 - 2297328 bp Length : 1908 bp Strand : + Note : - DNA sequence : ATGATTTCCTCGCGTGACCGTTTGACCAAGGCCCTGCCGCAGATAGCGGTCGTGGTACACGACCTATTGATGGTGTGGGT GTGCTGGCAGCTACTGCACGCCGGCCGCTATTCCATGTTGCGCCAGGCGCCGGATCTGCCGCTGTGGGATTGGCGCACCG GGGTGGTGTTGGTGGCGCAGGGTCTGGTGTTCTGGAAGATGGGGTTGTACCGCGGACTGTGGCGCTTCGCCTCGGTGCCG GACCTATGGAACATCTTCAAGTCGAGTTTCCTCGGCCTGGTCGCGATCGTGCTCGCGTTGTCGTACGACCGCCTGGATCG CGTGCCGTTGTCGGTGCTGGTGGTCTATCCGTTCGCGTTGTCGGCCATGCTGGGTACGCCGCGTTTGCTGTATCGCGCTT GGAAGGACTACCAGATCACGCATTCCGGTGATGCCGGGCAGCGCGTGCTGATCCTTGGAGCAGGGCGTGCTGCCGAAGGT TTGGTACGCGATCTGCGCCGTACTGGCGCGTTTGTGCCGATTGGTTATCTGGACGACGCCAACAACCTGCACGGCGCCAA GATCCAGGGTCTCAATGTGCTGGGCAATCTGGATCAAGCTGCTGCGATTGCCAAAGAAACTGCCGCCAAGCTGCTGGTCA TCGCGATCCCATCGCTGGATGCCTCCGGCATGCAGCGCGTTGTGGCGATCTGCGAAAGCACCGGCCTGCCGTTCCGCATG GTGCCCAAGCTGATCAACGTCCTGGAAGGGCGCTCGTTGCCGGGCGAGTTGAAGGAGGTCGCGATCGAGGATTTGCTCAA CCGCAAGCCGGTCACGCCCGACTGGCGCCTGATCCGCGACTGGCTGACCAACAAGACTGTGATGGTGACCGGCGCCGGCG GTTCGATCGGCTCGGAAGTCTGCCGCCAGTGCGCCCGTCACGGAGCGCGCCGGATCGTACTGTTGGAGATCGACGAGTTG GCGTTGCTGACCATCGACTCGGATCTGCGTCGGCTATTCCCGGATATCGAAGTGGTGCGCGTACTCGGCGATTGCGGCGA CCCGGCAGTGGTTGCGCATGCGCTGAACACCGCGACCCCGGATGCGGTGTTTCACGCTGCCGCTTACAAGCAGGTGCCGC TGCTGGAAGAGCAATTGCGCGAGGCGGTGCGCAATAACGTGCTGGCAACCGAGAACGTGGCGCGCGCCTGCCAGCGTGCA CGCATCGAAACCTTCGTCTTCATTTCTACCGATAAGGCGGTCGAGCCGGTCAACGTGCTGGGCGCAAGCAAGCGCTATGC AGAAATGATCTGCCAGAGCCTTGACGCGCGCGATGCGCCGACGCGCTTCATCACCGTGCGCTTCGGCAACGTGCTGGATT CGGCAGGCAGCGTGGTGCCATTGTTCCGCGAACAGATCCGTCAGGGCGGCCCGGTCACGGTGACGCATCCGGACGTGACG CGTTACTTCATGACCATCCCCGAAGCCTGCCAGTTGGTGATCCAGGCAGCGGCGTCTGCATCGCATGGTGCGATCTATAC GCTGGACATGGGGGAGCCTGTGCCGATTCGCCTGCTGGCCGAGCAGATGATCCGTCTGGCCGGCAAGCAGCCGGGCAAGG ACGTGGCGATTCTCTACACCGGCTTGCGTCCGGGCGAGAAGCTGCACGAGACGCTGTTCTATTCCGACGAAGACTATCGC CCCACCGCGCACTCCAAAATTCTCGAAGCCGGTGTGCGCGAGTTCTCGCATGAGCAAGTGCTGCAGCTGGTGACGCGCTT GCGCGAGGCCGTTAACCGCTATGACATCAACGCGATGGAGACGGTGCTGGGCAGTCTGATGCCGGATTTCGCGGCTGCTC GACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCACGTGAGGTCAGAAGACTGTAA Protein sequence : MISSRDRLTKALPQIAVVVHDLLMVWVCWQLLHAGRYSMLRQAPDLPLWDWRTGVVLVAQGLVFWKMGLYRGLWRFASVP DLWNIFKSSFLGLVAIVLALSYDRLDRVPLSVLVVYPFALSAMLGTPRLLYRAWKDYQITHSGDAGQRVLILGAGRAAEG LVRDLRRTGAFVPIGYLDDANNLHGAKIQGLNVLGNLDQAAAIAKETAAKLLVIAIPSLDASGMQRVVAICESTGLPFRM VPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIGSEVCRQCARHGARRIVLLEIDEL ALLTIDSDLRRLFPDIEVVRVLGDCGDPAVVAHALNTATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRA RIETFVFISTDKAVEPVNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTHPDVT RYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVAILYTGLRPGEKLHETLFYSDEDYR PTAHSKILEAGVREFSHEQVLQLVTRLREAVNRYDINAMETVLGSLMPDFAAARRKVDARSDTVVPFPAREVRRL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-73 | 42 |
cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-79 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
XOO2185 | YP_200824.1 | epimerase | VFG1300 | Protein | 5e-76 | 43 |