Gene Information

Name : XOO1715 (XOO1715)
Accession : YP_200354.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : phage-related capsid packaging protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 1771148 - 1772173 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence :
TTGATGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCAGCCGTGCCCGCACGCACCGAGGCGTTCACCTTTGG
CGACCCGACGCCGGTGCTCGATGGGCGCGGCGTGCTGGACTATCTGGAGTGCTGGCAGAACGGGCGCTGGTACGAGCCGC
CGGTGGCGCTGGATGGCCTGTCCAAGACCACGCGCAGCAATCCCTTCCTGCAGTCCGGGCTGATCTTCAAGCGCAACATG
CTGGCGCGCACCTTCAAGCCGCATCGGCTCCTGACGCGTGAGGCCTTCGAGCAGCTGTCGCTGGATTGGATCACCCTGGG
CAATGGCTACCTCGAGCGCCGCCGCAACCGCATGGGCGGTGCGCTGTCGCTGGCTGCGCCGTTGTCCAAGTACATGCGGC
GCGGTATCACCGAGGGCGAGTACTTCCAGGTGCGCACCTGGCACGACGAGCACGTGTTCGAGCCGGGCAGCGTGTTCCAG
CTGCGCGAAGCCGATGTCGATCAAGAACTCTACGGCCTGCCTGAGTGGATGCCGGCGATGCAGTCGGCGCTGCTCAACGA
ATCGGCCACGCTGTTTCGCCGCAAGTATTACAACAACGGCTCGCATGCCGGTTTCATCCTGTACCTGACCGACCCGCAGC
AGAGCCAGGAAGACGTCGATGCGCTGCGCACCGCCATGAAGGGCGCCAAGGGGCCGGGCAACTTCCGCAACCTGTTCCTG
TATTCGCCCGGCGGCAACAAGGATGGGCTGAAGCTCATCCCGGTCAGCGAAGTGGCGGCCAAGGACGAGTTCAGCGGCAT
CAAAGGCATCACCCGCGACGACATGCTCGCCGCGCTGCGCATCCCACCGCAACTCATGGGCATCGTGCCGCAGAACGCAG
GCGGCTTCGGATCGATCCGTGAGGCCGCTGCCGTGTGGGCCGCCAACGAGCTGGAGCCGCTGCAGGCGCGCATGCTGAAG
ATCAACGACTGGGTGGGCGATGAGGTGATCTCGTTCACCCAGTACGCGCCGCCAGCGACCGCGTAA

Protein sequence :
MMLTDQLPATAPAAPAVPARTEAFTFGDPTPVLDGRGVLDYLECWQNGRWYEPPVALDGLSKTTRSNPFLQSGLIFKRNM
LARTFKPHRLLTREAFEQLSLDWITLGNGYLERRRNRMGGALSLAAPLSKYMRRGITEGEYFQVRTWHDEHVFEPGSVFQ
LREADVDQELYGLPEWMPAMQSALLNESATLFRRKYYNNGSHAGFILYLTDPQQSQEDVDALRTAMKGAKGPGNFRNLFL
YSPGGNKDGLKLIPVSEVAAKDEFSGIKGITRDDMLAALRIPPQLMGIVPQNAGGFGSIREAAAVWAANELEPLQARMLK
INDWVGDEVISFTQYAPPATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-115 71
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-93 57
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-93 57