Gene Information

Name : XOO1713 (XOO1713)
Accession : YP_200352.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : phage-related capsid scaffold protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1768403 - 1769245 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGGCAAGACCAAGAAGTTCCGTTCCAACTGGTTCCGCGTGGCCGTCGAAGGCGCCACCACCGACGGCCGCACGAT
CCAACGCAGCTGGATTGACGACATGGCCGCCACCTACAACCGCGAGACCTACGGTGCGCGCATCTGGATCGAGCACATGC
GCAGCTTGCTGCCGGACTCGCCCTTCCGTGCGTATGGCGATGTCACAGCCGTCAAAGCCGAAGAGGTCGAGATCGATGGC
AGCAAGCGTCTGGCGCTGTTCGCACAGATCGAGCCGACCGCCGATCTGATCACCATCAACAAGTCCAAGCAGAAGCTCTA
CACCAGCATCGAGGTGCAGGAGAAATTCGCCAACACCGGCAAGGCGTATCTGGTCGGCTTGGCCGTCACTGATTCGCCCG
CGAGCTTGGGTACCTCGATGCTGATCTTTGCCAGCCAACACCCGGATGCCAATCCGCTGGCCGATCGCAAGCAATCACCC
GGCAACCTGTTCACCGTCGCCGAAGAAACCACGCTGGAATTCAGCGAGGTCAGCGAAGGCTCGGTCGCCAACTTGCTTAG
CCGGATTCGCACCGCGCTCAGGAGCGAGGACGCAACCAACATCACTGCCCAGCAGTTCGCCGACCTCGGCCAGGGTGTCG
AAGAGATCGCCGAGCACGTGCGTGGCCAGGACGAACGGTTCGCCGGCCTGCAGGCCGAACACGCCGCGCAGAAGACCAAG
CACGAACAGCTGGCGAACGACCTGGCGCAGCTGCGCGAGTTGCTGTCGCAGCAGGCCGACCCCTCGCAGCCCACACGCCC
GGTGGTCACCGGCGGCGGCGCGGCCGTGCTGACCGACTGCTGA

Protein sequence :
MSGKTKKFRSNWFRVAVEGATTDGRTIQRSWIDDMAATYNRETYGARIWIEHMRSLLPDSPFRAYGDVTAVKAEEVEIDG
SKRLALFAQIEPTADLITINKSKQKLYTSIEVQEKFANTGKAYLVGLAVTDSPASLGTSMLIFASQHPDANPLADRKQSP
GNLFTVAEETTLEFSEVSEGSVANLLSRIRTALRSEDATNITAQQFADLGQGVEEIAEHVRGQDERFAGLQAEHAAQKTK
HEQLANDLAQLRELLSQQADPSQPTRPVVTGGGAAVLTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 1e-65 51
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 6e-45 41
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 6e-45 41