Gene Information

Name : XOO1640 (XOO1640)
Accession : YP_200279.1
Strain : Xanthomonas oryzae KACC10331
Genome accession: NC_006834
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1700857 - 1701843 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence : 
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGCTCAAGGATCTGGAGGCCGAGAACACGCGGCTGA
AGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAACAAATGGTGAGCGCACCGGCG
CGTCGTGCGCTGGTGCGCGAGTGGACGCAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATTGCCCGCGCGAGGACCGCAACGTTGAGCTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATT
GCGAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCCGGTGTGGTCCATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGT
GGACGACGCGACACACCAGGCAGTCGCCATCGAGGTGGAACGCGCCATCTCCGGCCACGGGGTAGCACGCGTGCTGGATC
GGTTGGCACACAGCGGCGGCCTGCCGCAGGTGATCCGCACGGACAATTGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATCGTGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAA
CGGCCGGCTACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACGAACACCGCCCCAAAAAAACAATCGGCGGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCAAT
AGCGATATCATCAACCCCGGACTCTAA

Protein sequence : 
MAQQVRRHERARCQAAQGSGGREHAAEEVAGRAGVPERPDQGCAAKTNGERTGASCAGARVDAGGASERCALAAIGMSAS
ALRYCPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQLQVRRRTRKKVPVGERAPLLRPT
KANPVWSMDVVFDRTAEGRAIKCLVIVDDATHQAVAIEVERAISGHGVARVLDRLAHSGGLPQVIRTDNCKEFCGKAMVA
WAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKTIGGMTPAAYAQQLAN
SDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 8e-56 50
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-32 41